KEGG T01957: LBU

Lactobacillus delbrueckii subsp. bulgaricus 2038: LBU_0005

Entry

LBU_0005          CDS       T01957

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

ldl Lactobacillus delbrueckii subsp. bulgaricus 2038

Brite

KEGG Orthology (KO) [BR:ldl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ldl03032]
    LBU_0005
   03400 DNA repair and recombination proteins [BR:ldl03400]
    LBU_0005
Enzymes [BR:ldl01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LBU_0005
DNA replication proteins [BR:ldl03032]
Prokaryotic type
  DNA Topoisomerases
   LBU_0005
DNA repair and recombination proteins [BR:ldl03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LBU_0005

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

ADY84190

Position

4534..6495

AA seq 653 aa
MADEDNKLKKAKQFEQEADKYNASQIQVLGGLEAVRKRPGMYIGSTSSQGLHHLVWEIID
NGIDEALAGFATKIEVTVNEDNSVTVQDDGRGIPVDIEKKTGRPAVETVYTVLHAGGKFG
GGGYKVSGGLHGVGASVVNALSTKLNVTVMRDGKKYYIAFDHGRVVEELKEVGTVPLTEH
GTIVHFWPDPNIFTETTVFDDKILKNRIRELAFLNKGLKLTFTDKRKDTAETDVYHFEGG
IKEYVSFLNRGQEVLFDEPIYVEGKYEGIDVEVSLQYTTGYKTTLMTFANNIHTYEGGMH
EAGFKTALTRVINDYAHKAKILKENDDNLSGEDIREGMTAVISVKHPSPQFEGQTKTKLG
NSDARTAVDRAFSETFSTFLMENPQVARKIVEKGQLAERARVAAKRAREVTRKKSGLEIA
NLPGKLADNTSNDPNISELFIVEGDSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDRI
LANQEIRTLFTALGAGFGADFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYRYMRPMI
DKGYVYIARPPLYQVRQGKLIKYLDTDEELHDYLGSLQPSPKPIVQRYKGLGEMDAEQLW
ETTMDPENRRLDRVDPEYAKDADEVFEMLMGNEVGPRRKFIEDNAQYVENLDA

NT seq 1962 nt +upstreamnt +downstreamnt
atggcagacgaagataacaaattgaagaaggccaagcagtttgaacaagaagctgacaag
tacaatgccagccagattcaagtccttggcggcctggaagccgtacgcaagcgtccgggg
atgtacattggctcaaccagctcccagggcttgcaccacctggtctgggaaatcatcgac
aacgggatcgacgaagccctggcaggtttcgcgaccaagatcgaagtcaccgtcaacgaa
gacaacagcgtgactgtccaagacgacgggcgggggatcccggtcgacatcgaaaagaag
accggccggccagccgttgaaactgtttatacggttctgcacgccggtggtaagtttggc
ggtggcggatacaaggtttccggcggtctgcacggggtcggggcttccgttgtcaacgcc
ctgtccaccaagctgaacgtcactgtcatgcgggatggcaagaagtactacatcgccttt
gaccacggccgggtcgttgaagagctgaaggaagtcggcacggtgcctttgactgaacac
gggaccatcgtccacttctggccggacccgaacatcttcacggaaaccacggtttttgac
gacaagatcttgaagaaccggatccgggaactggccttcttgaacaaggggctgaagctg
accttcactgacaagcgtaaggacacggcggaaaccgacgtctaccacttcgaaggcggg
atcaaggaatacgtctccttcctcaaccggggccaggaggtactttttgacgagccaatc
tacgtggaaggcaagtacgagggcatcgacgttgaagtatctttgcagtacacgaccggc
tacaagacaaccttgatgacttttgccaacaacatccacacttatgaaggcgggatgcac
gaggcgggcttcaagacagccttgacccgggtgatcaacgactacgcccacaaggccaag
atcttgaaggaaaacgacgataacctgtccggggaagacatcagggaagggatgacggcc
gtgatttccgtcaagcacccgagcccgcagtttgaagggcagaccaagaccaagctgggc
aactccgacgccagaactgccgttgaccgggccttctcagaaaccttctccactttcttg
atggaaaacccgcaggtggcccgcaagatcgtggaaaaggggcaactggctgaaagagcc
agagttgccgccaagcgcgcccgggaagttacccggaagaagtccggcctggaaatcgcc
aacctgccaggcaaattggccgacaacacttcaaatgacccgaacatctcagaactcttc
atcgtcgaaggggactccgccggcggcagcgccaagcaagggcggagccggctgacccag
gccatcctgcccatccgggggaagatcctgaacgtggaaaaggcctcaatggaccggatc
ctggccaaccaggaaatccggactctgtttacggccctgggggccggctttggggcagac
tttgacgtctccaaggcccgctatcacaagctgatcatcatgactgacgccgacgtcgac
ggggcccacatccggaccctgctcttgaccctcttctaccgctacatgcggccgatgatc
gacaagggctatgtttacatcgcccgtccgcctctgtaccaagtgcgccagggcaagctg
atcaagtacctggacactgatgaagaactccacgactacctggggtcattgcaaccaagc
ccgaagccaatcgtgcagcgctacaaggggctgggggaaatggacgctgagcaattgtgg
gagacgaccatggaccctgaaaaccgccgcctggaccgggtggacccggaatacgccaag
gacgcggatgaagtctttgaaatgctgatgggcaacgaagttggcccgcggcgcaagttc
atcgaagacaatgcccaatatgttgaaaacttggatgcttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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