KEGG T01957: LBU

Lactobacillus delbrueckii subsp. bulgaricus 2038: LBU_0345

Entry

LBU_0345          CDS       T01957

Name

(GenBank) RNA-polymerase DNA-directed

K03040

DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]

Organism

ldl Lactobacillus delbrueckii subsp. bulgaricus 2038

Pathway

ldl03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:ldl00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LBU_0345
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ldl03021]
    LBU_0345
   03400 DNA repair and recombination proteins [BR:ldl03400]
    LBU_0345
Enzymes [BR:ldl01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LBU_0345
Transcription machinery [BR:ldl03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LBU_0345
DNA repair and recombination proteins [BR:ldl03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LBU_0345

SSDB

Motif

Pfam:

RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5

Other DBs

NCBI-ProteinID:

ADY84530

Position

349868..350806

AA seq 312 aa
MIEFKKPNITVVDQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSVPGTGLVKVKIDGIL
HEFTTVPGVKEDVTKIILNLKKLELRAYTEEVKTIELDVEGPATVTAEDLKADADVEVLN
PDQYICTIAQGGHLHMWIDVCNGRGYVPASENKTAEMSIGDIPVDSLFSPIEKVNYQVES
TRVGKREDFDKLTLEIWTNGSIAPNDALNFAARVLVEHFKAFESADAAAEIGEVMVEQEN
DQKEKKLEMTIEDLDLSVRSYNCLKRAGINTLQDLTVKSEAEMMRVRNLGRKSLEEVKNK
LADLGLSLRQED

NT seq 939 nt +upstreamnt +downstreamnt
atgattgaatttaaaaaaccaaatattaccgtcgtggatcaagaagacagttacggtaag
tttgtcgttgaaccgctggagcgtgggtttggtactaccttaggtaattcactgcgtcgg
gttttgctgacttctgtcccagggaccggtttggtgaaggtgaagatcgatggtatcttg
cacgaattcactactgttcccggtgttaaagaagacgtaaccaagatcatcttgaacctg
aagaagcttgaactccgggcctacactgaagaagtaaagacgatcgaactcgatgttgaa
ggtccagctacggtaactgctgaagatttgaaggctgatgctgatgttgaagtcttgaat
cctgaccaatacatttgtaccatcgctcaaggtggccacctgcacatgtggattgatgtc
tgcaacggccggggctacgtaccagccagcgaaaacaagactgctgaaatgtccatcggc
gacattccagttgactcacttttctcaccaatcgaaaaggtcaactaccaagttgaatca
acccgggttggtaagagagaagactttgacaagcttaccctggaaatttggacaaatggt
tcaatcgctccgaatgacgccctcaactttgccgcccgtgttctggtcgaacacttcaag
gccttcgaatcagctgacgctgctgccgaaatcggcgaagttatggtagaacaggagaac
gaccaaaaggaaaagaaactcgaaatgactatcgaggacctggacctttcagttcgttca
tacaactgcttgaagcgggctggcatcaacaccctgcaagacttgactgttaagtcagaa
gcagaaatgatgcgggtacgcaacctgggacgtaaatcattggaagaagttaagaataaa
ttggcagacctgggtctttcacttcgtcaagaagactag

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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