KEGG   Leclercia sp. J807: GNG26_21250
Entry
GNG26_21250       CDS       T06440                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lea  Leclercia sp. J807
Pathway
lea03420  Nucleotide excision repair
lea03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GNG26_21250 (uvrD)
   03430 Mismatch repair
    GNG26_21250 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lea03400]
    GNG26_21250 (uvrD)
Enzymes [BR:lea01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GNG26_21250 (uvrD)
DNA repair and recombination proteins [BR:lea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GNG26_21250 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     GNG26_21250 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor AAA_30 UvrD_C_2 AAA_22 PhoH
Other DBs
NCBI-ProteinID: QGU12726
UniProt: A0A9Q6Q535
Position
complement(4470068..4472230)
AA seq 720 aa
MDVSYLLDSLNDKQRDAVAATRTNMLVLAGAGSGKTRVLVHRIAWLQSVENCSPYSIMAV
TFTNKAAAEMRHRIAQLMGTSQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSFGNPIEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDS
SKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTNNILSAANALIENN
NGRLGKKLWTEGIDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQERALAGRAASALQRFLELIEALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPEECVEEVRLRASISRPVSHQRLG
TPVSESDSGFKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgacgcggttgccgcg
acgcgcaccaatatgctggtgctggcaggggcgggcagtggtaagacacgcgtgctggta
caccgtatcgcctggctgcagagcgtggagaactgttcgccatactccattatggcggtg
accttcaccaacaaagcggcggcggagatgcgccaccgtatcgcccagctgatgggcacc
agccagggcggcatgtgggtgggtaccttccacgggctggcgcaccgcctgctgcgtgcg
caccatctggacgctaacctgccgcaggactttcagatcctcgacagcgaagatcagctg
cgtcttctgaagcgcctgatcaaagccatgaacctcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacagccagaaagacgaagggctgcgtccgcaccatatccag
agctttggtaatccgattgagcagacctggcagaaggtctaccaggcctatcaggaagcc
tgcgatcgcgccgggctggtggattttgccgagctgctgttgcgcgctcatgagctgtgg
ctgaacaaaccgcatattctgcagcactatcgcgaacgctttaccaacatcctggtggac
gaattccaggatactaacaacattcagtacgcgtggatccgcctgctggcgggcgactcc
agcaaggtgatgatcgtgggtgacgacgatcagtcaatctacggctggcgcggcgcgcag
gtcgagaacatccagcgcttcctgaaggatttcccgggcgcagagactattcgcctggaa
cagaactaccgctctaccaacaacattctgagcgcagccaacgccctgattgaaaataac
aatggccgcctgggcaaaaagctctggaccgagggcatcgacggcgagccgatctccctc
tactgcgcctttaacgagttggatgaagcccgctttgtggtcaaccggatcaaaacctgg
caggacaacggcggggcgctggagcagtgcgccattctctatcgcagcaacgcccagtcg
cgtgtgctggaagaggcgctgctacaggccagcatgccctaccgcatctatggcggcatg
cgcttcttcgaacgtcaggagatcaaagacgcgctctcctatctgcgtctgatcgccaac
cgcaacgacgacgcagccttcgagcgcgtggttaacacgccaacccgcggcatcggcgat
cgcaccctggacgtggtgcgtcagacctcccgggatcgccagttgacactgtggcaggcg
tgtcgcgagctgctgcaggagcgggcgcttgccggacgcgcagccagcgcgctgcagcgc
ttcctggagcttatcgaagctctggcgcaagaaacagccgacatgccgttgcacgttcag
accgaccgggtgatcaaagactccggcctgcgcatgatgtatgagcaggagaaaggcgag
aagggccagacccgtattgagaacttagaggaactggtgaccgccacgcgtcagttcagc
tacaacgaagaagatgaagacctgatgccgctgcaggcgttcctgtcccatgccgcgctg
gaggcgggcgaagggcaggccgacacctggcaggacgcggtgcagctgatgaccctccac
tcggccaaaggtctggagttcccgcaggtgtttatcgtcggcatggaagaggggatgttc
ccgagccagatgtcgctggatgagggcggccgtctggaggaggagcgtcgtctggcctat
gtgggcgtgacccgcgcgatgcaaaagctgaccctgacctatgccgaaacccgccgtctg
tacggcaaagaggtctatcaccgcccgtcacgctttgtcggcgagctgccggaggagtgc
gtggaagaggtacgcctgcgcgccagcatcagccgcccggtgagccatcagcgtctgggg
acgccggtctcggaaagcgacagcggctttaagctgggccagcgtgttcgccatgccaaa
tttggcgaaggcaccatcgtcaatctggagggtagcggcgagcacagccgtctgcaggtg
gcgttccaggggcagggcatcaaatggctggtggccgcttacgccaagctggaaaccgtg
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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