KEGG   Leclercia sp. W17: DVA44_04530
Entry
DVA44_04530       CDS       T05987                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
lee  Leclercia sp. W17
Pathway
lee03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DVA44_04530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lee03019]
    DVA44_04530
Messenger RNA biogenesis [BR:lee03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     DVA44_04530
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: AXF63452
UniProt: A0A345C6P7
Position
896438..896968
AA seq 176 aa
MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSSDADINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASAVMMLQEVPPKPQSAPAWRRKRG
NT seq 531 nt   +upstreamnt  +downstreamnt
gtgattgatgacgatggctaccgcccgaatgtaggtatcgtaatttgtaatcgccagggg
caggtcatgtgggcccggcgatatggtcagcactcctggcaatttccccaaggcgggatt
aaccctggagagtccgcagagcaagcgatgtatcgggagctgttcgaagaagttggctta
agccgcaaggatgttcgcattctggcttcgacccgcaactggttgcgttacaagttaccg
aagcgtttggtgcgttgggacacaaagccggtatgtatcggccagaaacagaaatggttt
cttctgcaattggtgagcagcgatgcggatatcaatatgcaaaccagcagcacgcctgag
tttgatggctggcgctgggtcagctactggtatcccgttcggcaggtcgtgtcgtttaag
cgcgatgtttaccgtagggtgatgaaagagttcgcaagtgccgtaatgatgcttcaggag
gttcctcctaagccccagagcgcacctgcctggcgacgtaaaagaggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system