KEGG   Lelliottia jeotgali: LJPFL01_3386
Entry
LJPFL01_3386      CDS       T05035                                 
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lef  Lelliottia jeotgali
Pathway
lef03410  Base excision repair
lef03430  Mismatch repair
lef03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LJPFL01_3386
   03430 Mismatch repair
    LJPFL01_3386
   03440 Homologous recombination
    LJPFL01_3386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lef03400]
    LJPFL01_3386
DNA repair and recombination proteins [BR:lef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LJPFL01_3386
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LJPFL01_3386
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LJPFL01_3386
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: ASV56749
Position
complement(3631276..3633009)
AA seq 577 aa
MKANTTLRRREVDESVDLPADLSPLLRRLYAGRGVRAATELERSVKGMLPWQQLSGIEKA
TEILYDALREGTRIVVVGDFDADGATSTALSVLSLRALGCDNVTYLVPNRFEDGYGLSPE
VVDQAHARGAQLILTVDNGISSHSGVDRAHQLGIPVVVTDHHLPGDTLPAAEAIINPNLR
DCDFPSKSLAGVGVAFYLMLALRALLRDKGWFEARGIAVPNLAEYLDLVALGTVADVVPL
DTNNRILTWQGLGRIRAGKCRPGIKALLEISNRDPLKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSTDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLMIKFGGHAMAAGLSLEEAKFDEFQRLFSELVTDWLDPALLQGEVVSDGALSGAEMTME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVNGGPLLDGIAFNVDTA
IWPDSGVREVELAYKLDINEFRGNRSLQIIIDHIWPI
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgaaagccaacacaacattacgccgccgcgaggtggatgaaagcgttgatttacctgcc
gatctatctccgctcctgcgccgtttatacgccgggcgcggcgttcgcgcggccacagag
ctggagcgcagcgtcaaagggatgctgccctggcagcagctcagtggcatcgaaaaagcg
acggaaattctctatgacgcactgcgcgaagggacgcggattgtcgtagtcggtgatttc
gacgccgatggcgcgaccagcaccgctctaagcgtcctcagcctgcgcgcgttgggctgc
gataacgtcacctatctggtgccgaaccgttttgaagacggttacggcctcagcccggaa
gtggtcgatcaagctcacgctcgcggggcgcagttgatcctgacggttgataacgggatc
tcatctcattctggcgtcgatcgggcgcatcagcttgggatcccggtcgtggtcaccgat
caccatttgcccggcgacacgctgccagcggctgaagccatcattaacccgaacctgcgc
gactgcgatttcccctcgaaatcgcttgcgggcgtaggcgtagcgttttatctgatgctg
gccctgcgtgcgttgctgcgcgataaaggctggttcgaggcgcgcggaattgcagttcct
aatcttgccgaatatctcgatttagtcgcgctcggcacggtggcagacgtggtgccactc
gacactaataaccgcattctgacctggcaagggctgggcaggattcgtgcggggaaatgc
cgtccggggattaaagcgctgctcgaaatctctaatcgtgacccgcttaaactcgcggca
agtgacctcgggtttgcccttggcccgcgtctcaatgcggcagggcgactggatgatatg
tccgtcggggtggcgctgctgctctgcgacaatatcggcgaagcccgcgtgttagccaat
gaactcgacgcgctgaatcagacgcgcaaggagatcgagcaagggatgcaggctgaagcc
ctgactctgtgcgaaaaacttgagcgcagcaccgacacgctgccaggcggcctggcgatg
taccacccggagtggcatcagggcgtggtcgggattctggcgtcgcgcatcaaagagcgt
tttcaccgtccggtgattgcctttgccccggcgggcgacggtacgcttaaaggctcgggt
cgttccattcaagggctgcacatgcgcgatgcactggagcgtctggacacactctatcct
gggctgatgatcaaattcggcggccacgcgatggcggctggtttatcactagaagaggcg
aaattcgacgagtttcagcggcttttcagcgagctggttaccgactggctggacccggcg
ttactgcagggcgaagtggtctctgatggcgcgctgtctggcgcggagatgacgatggaa
gtcgcgcagatgctgcgcgatgccggtccgtgggggcagatgtttccggagccgctgttc
gacggtcgattccgcctgctgcaacagcgtctggtgggtgagcgtcacctgaaggtgatg
gtcgagccggtgaacggtggcccgctgctggatggaatcgcctttaacgtcgacaccgcc
atctggccggatagcggtgtgcgtgaagttgaactggcctacaaactggatattaacgag
tttcgcggtaatcgcagtttgcagattatcatcgatcatatctggccaatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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