KEGG   Lelliottia jeotgali: LJPFL01_3704
Entry
LJPFL01_3704      CDS       T05035                                 
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
lef  Lelliottia jeotgali
Pathway
lef03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lef00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LJPFL01_3704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lef03019]
    LJPFL01_3704
   03016 Transfer RNA biogenesis [BR:lef03016]
    LJPFL01_3704
Enzymes [BR:lef01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     LJPFL01_3704
Messenger RNA biogenesis [BR:lef03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     LJPFL01_3704
Transfer RNA biogenesis [BR:lef03016]
 Prokaryotic type
  tRNA degradation factors
   LJPFL01_3704
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 S1_2 aRib KH_2 SLS1_KH2 DUF4172
Other DBs
NCBI-ProteinID: ASV57067
Position
complement(3968439..3970511)
AA seq 690 aa
MMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGKIPGGFFRRE
GRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLS
GIPFNGPIGSARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQM
LGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNEALNARVAALAEARLSDAYRIT
DKQERYAQIDVIKSETIATLVAEDESLDANELSEILHAIEKNAVRSRVLAGEPRIDGREK
DMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQNIDELMGERTDSFLFHYN
FPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADKFPYTVRVVSEITESNGSSSMA
SVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSDILGDEDHLGDMDFKVAGSREG
ISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISQFAPRIHTIKIS
PDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKFAIRRIEEITAEIEV
GRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMNQEVPVKVLEVDR
QGRIRLSIKEATEQSQPAAAPEAPAAEQGE
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgatggcacgtcaggctactgctgccgttatggtaagcatggatgacactgctgtattc
gtgaccgttgttggccagaaaaaagcaaaaccaggtcaggacttcttccctctgaccgtt
aactatcaggagcgtacctacgctgctggtaaaatccctggtggcttcttccgtcgtgaa
ggccgtccaagcgaaggcgaaaccctgattgcgcgtctgattgaccgcccggttcgtccg
ctgttcccggaaggcttcgttaacgaagttcaggttatcgcgaccgttgtttccgttaac
ccacaggttaacccggatatcgttgcgatgatcggtgcatccgctgcactgtccctgtca
ggcattccattcaacggtcctatcggttctgctcgtgtgggttacatcaacgaccagtat
gtactgaacccgactcaggatgagctgaaagaaagtaagctggatctggttgttgccggt
accgaagctgcagtactgatggttgaatccgaagctgaactgctgagcgaagaccagatg
ctgggcgctgtggtgtttggccacgaacagcagcagattgttatccagaacatcaacgac
ctggtgaaagaagccggtaaaccacgttgggactggcagccagaagccgtgaacgaagcg
ctgaacgcgcgcgttgctgccctggcagaagctcgtctgagcgacgcataccgcatcact
gacaaacaagagcgttacgctcagattgatgtcatcaaatctgaaaccatcgctacgctg
gttgcagaagatgaatccctggatgcaaacgagctgagcgaaatcctgcacgctatcgag
aaaaatgccgtacgtagccgcgttctggctggcgaaccgcgtatcgatggccgtgaaaaa
gacatgatccgtggtctggatgtgcgtactggcgttctgccacgtactcacggttccgca
ctgttcacccgtggcgaaactcaggcgctggtaacagcaactctgggtaccgcacgtgac
gcgcagaacatcgacgaactgatgggcgagcgcactgacagcttcctgttccactataac
ttccctccgtactccgtaggcgaaaccggtatggttggctcacctaagcgtcgtgaaatt
ggtcacggtcgtctggcgaagcgcggcgtgctggctgttatgccggaagctgacaaattc
ccgtacaccgttcgtgtggtttctgaaatcaccgaatctaacggttcttcttctatggct
tccgtttgtggcgcttctctggccctgatggatgcaggcgtgccaatcaaagccgctgtt
gcgggtatcgcaatgggcctggtgaaagaaggcgacaactttgttgttctttctgacatc
ctgggcgacgaagatcacctgggtgatatggacttcaaagttgcgggttcccgcgaaggt
atctctgctctgcagatggatatcaaaattgaaggcatcaccaaagagatcatgcaggtt
gcactgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggcgatt
aacgcaccgcgtggcgatatttctcagttcgcaccgcgtatccacactatcaagatcagc
ccggacaagatcaaagacgtgatcggtaaaggcggttctgtgatccgtgctctgaccgaa
gaaactggcaccaccatcgaaatcgaagatgacggtactgtgaagatcgctgcgaccgac
ggtgaaaaagcgaaattcgctattcgtcgtatcgaagagatcactgcagaaatcgaagtg
ggtcgtatctacaatggtaaagtgacccgtatcgttgactttggcgcgttcgttgccatc
ggtggcggtaaagaaggtctggttcacatctctcagatcgctgacaagcgcgttgagaaa
gtgaccgattacctgcagatgaaccaggaagtaccggttaaagttctggaagttgaccgc
cagggccgtatccgtctgagcattaaagaagcaaccgagcagtctcagcctgctgccgcg
ccggaagcaccggccgcagaacaaggcgagtaa

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