KEGG   Lelliottia jeotgali: LJPFL01_4098
Entry
LJPFL01_4098      CDS       T05035                                 
Name
(GenBank) ATP-dependent DNA helicase UvrD,PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lef  Lelliottia jeotgali
Pathway
lef03420  Nucleotide excision repair
lef03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LJPFL01_4098
   03430 Mismatch repair
    LJPFL01_4098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lef03400]
    LJPFL01_4098
Enzymes [BR:lef01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LJPFL01_4098
DNA repair and recombination proteins [BR:lef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LJPFL01_4098
   MMR (mismatch excision repair)
    Other MMR factors
     LJPFL01_4098
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_22 PhoH
Other DBs
NCBI-ProteinID: ASV57461
Position
complement(4382885..4385047)
AA seq 720 aa
MDVSYLLDSLNDKQRDAVAATRTNMLVLAGAGSGKTRVLVHRIAWLQCVENCSPYSIMAV
TFTNKAAAEMRHRIAQLMGSSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSFGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRMLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISIYCAFNELDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQVGMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVVKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASISRPVNHQRMG
TPISENDTGYKLGQRVRHSKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttcttaccttctcgacagccttaatgacaaacagcgtgacgcggttgccgcg
acgcggaccaatatgctggtgctggcaggggcgggcagtggtaagacgcgtgttctggtg
catcgtattgcgtggctacagtgcgtcgaaaactgctcgccgtattccatcatggcggtg
accttcaccaacaaagcggcggcggaaatgcgccaccgtatcgcgcagctgatgggctcc
agtcagggcggcatgtgggtgggcactttccacgggctggcgcaccgcctgctgcgtgcg
caccacatggacgcgaatctgccgcaggatttccagatcctcgacagcgaagaccagctg
cgtctgctcaagcgcctgatcaaggcgatgaatctcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggccagaaagacgaagggctgcgcccgcaccacattcag
agcttcggtaatccggtcgagcaaacctggcagaaagtgtatcaggcctatcaggaagcc
tgcgatcgcgccgggctggtggattttgccgaactgctgctgcgtgcccacgagctgtgg
ctcaataaaccgcacattcttcagcactaccgtgaacgcttcaccaatatcctggtggac
gaattccaggataccaacaacattcagtatgcgtggatccgtatgctcgcgggcgacacc
ggcaaggtgatgatcgtcggcgatgacgaccagtcgatttacggctggcgcggtgcgcag
gtggaaaacattcagcgtttcctgaaggatttccccggcgcagaaaccatccgtctggag
cagaactaccgttcaaccagcaacatcctgagtgccgccaacgccctgattgaaaacaac
aacgggcgtctgggcaaaaaactgtggaccgacggcgtcgacggcgaaccgatttcgatt
tactgcgcgttcaacgaactggacgaagcgcgttttgtcgtcaaccgaattaaaacctgg
caggagaacggcggagcgctggaacagtgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaagcacttttgcaggtcggtatgccgtatcgtatttacggtgggatg
cgcttcttcgaacgccaggaaattaaagatgcgctctcgtacctgcgtctgattgccaac
cgcaacgatgatgcggcttttgagcgcgtagtgaataccccgacgcgcggcatcggcgac
cgtactctggacgtggtgcgtcagacttcccgcgaccgtcagctcaccctgtggcaggcg
tgccgtgagctgttgcaggaaaaagcgctggcaggacgcgccgcaagtgcgttacagcgc
tttatggaactgatcgacgccctggcacaagaaactgccgacatgccgctgcacgtgcaa
actgaccgggtcgtgaaagattccggcctgcgcatgatgtacgagcaggaaaaaggcgag
aaaggacagacgcgaattgagaacttagaggaactggtgacggccacgcgccagttcagc
tacaacgaagaagacgaagatttgatgccattgcaggcattcctctcccacgcggcgctg
gaagcgggcgaagggcaggcggatacctggcaagatgcggttcaactgatgacgctgcac
tcggcaaaagggcttgagttcccgcaggtgtttatcgtcgggatggaagaggggatgttc
ccaagccagatgtcgctggatgaaggcgggcgtcttgaagaagaacgtcgtctggcctac
gtgggtgtcacccgtgcgatgcaaaaactgacgctgacctacgcggaaacccgccgtttg
tacggcaaagaggtctatcatcgtccgtcgcgctttatcggcgaactgccggaagagtgc
gtggaagaggtgcgcttgcgcgccagtatcagtcgcccggtaaaccatcagcggatgggc
acgccgatctcggaaaacgataccggctacaagctgggccaacgcgtacgccattccaaa
tttggtgaaggtaccatcgtgaatctggaaggcagcggcgagcacagtcgcttgcaggtt
gcgttccaggggcaagggatcaaatggctggtggcggcctacgccaagctggaaacagtg
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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