KEGG   Leclercia sp. LSNIH3: C3F35_17225
Entry
C3F35_17225       CDS       T05316                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
leh  Leclercia sp. LSNIH3
Brite
KEGG Orthology (KO) [BR:leh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:leh03009]
    C3F35_17225
   03016 Transfer RNA biogenesis [BR:leh03016]
    C3F35_17225
Enzymes [BR:leh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     C3F35_17225
    5.4.99.29  23S rRNA pseudouridine746 synthase
     C3F35_17225
Ribosome biogenesis [BR:leh03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    C3F35_17225
Transfer RNA biogenesis [BR:leh03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    C3F35_17225
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AUY40387
Position
complement(3534736..3535422)
AA seq 228 aa
MSAIIDTFIAPPCHTPIETLWQDDHLVLINKPSGLLSLSGKNPQNLDSVHHRLVQTFPGC
TLVHRLDFGTSGLMVIARNKAINAALCQQFSQRSVSKIYTALLCGHLADDDGVIDAPIAK
DPALFPLMSICAISGKPARSRYRVIERFYHHENVPVTRVALTPETGRTHQLRIHCQQLGH
PILGCDLYGGLLPPGTEKTPRLMLHASELHFVHPISGEPMVVRSASPF
NT seq 687 nt   +upstreamnt  +downstreamnt
atgtctgccattatcgatacctttattgccccgccgtgccacaccccgatagagacgctc
tggcaggacgatcatctggtgctgatcaataagcccagcgggctgctcagcctgtcgggc
aagaatccgcaaaacctcgattccgtgcatcaccggctggtgcagacatttcccggctgc
accctggtgcatcgcctggatttcggcacctccgggctgatggtgattgcccgtaacaag
gcgatcaatgccgctctctgccagcagttcagccagcgcagcgtcagcaaaatctacacc
gccctgctctgcggccatctggccgatgacgacggggtgatagacgcccccattgccaaa
gatccggccctgttcccgctgatgtcgatttgcgccatcagcggcaagcccgcccgctcc
cgctatcgggtcatcgagcgcttttatcatcatgaaaacgtgccggtgacgcgggtcgcc
ctcaccccggagaccggtcgcacccaccaactgcgtattcactgccagcagttgggccac
cccattctgggctgcgacctgtacggcgggcttctgccccccggcaccgaaaagacgccg
cgactgatgctgcacgccagcgagctgcattttgtccatcccattagcggggaaccgatg
gttgttcgcagtgccagcccgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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