KEGG T05316: C3F35

Leclercia sp. LSNIH3: C3F35_18820

Entry

C3F35_18820       CDS       T05316

Name

(GenBank) tRNA pseudouridine(38-40) synthase TruA

K06173

tRNA pseudouridine38-40 synthase [EC:5.4.99.12]

Organism

leh Leclercia sp. LSNIH3

Brite

KEGG Orthology (KO) [BR:leh00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:leh03016]
    C3F35_18820
Enzymes [BR:leh01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     C3F35_18820
Transfer RNA biogenesis [BR:leh03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C3F35_18820
Prokaryotic type
    C3F35_18820

SSDB

Motif

Pfam:

PseudoU_synth_1 DUF2344

Other DBs

NCBI-ProteinID:

AUY40659

Position

3875213..3876025

AA seq 270 aa
MSEVEQKPVHKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPVNVLCAGRTD
AGVHGTGQVVHFETTAVRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRY
IIYNQRLRPAVLGQGVTHFYEPLDADRMHRAAQALIGENDFTSFRAVQCQSRTPWRNVMH
IHVSRYGAYVVVDIKANAFVHHMVRNIVGSLMEVGAGHQPESWIAELLAAKDRTLAAATA
KAEGLYLVSVDYPDRFDLPKPPMGPLFLAD

NT seq 813 nt +upstreamnt +downstreamnt
atgtcagaagtggaacaaaagccggtccataaaattgccctcgggattgagtacgatggc
agtaaatattatggctggcagcgtcagaacgaggtgcgcagcgtccaggagaaactggag
aaagcgctctctcaggtggcaaatgaacctgtaaatgtcctgtgcgcggggcgtaccgac
gcgggtgtccacggcacggggcaggtggtgcattttgaaaccaccgcggtgcgcaaagac
gcggcctggacgctgggggtaaatgcgaatttgcctggagacatcgcggttcgttgggtc
aaaactgtgccggacgattttcacgcgcgtttcagcgcaactgcgcgtcgctaccgttac
atcatctacaatcagcgtctgcgtccggcggtgttaggccagggcgtaacgcatttttat
gagccgctggatgccgatcgcatgcaccgcgcggcacaggcactgattggcgaaaacgac
tttacctcgtttcgcgcggtacagtgccagtcgcgtacgccgtggcgcaacgtgatgcac
attcacgtcagccggtatggcgcgtatgtcgtggtcgatatcaaagccaatgcctttgta
catcatatggtgcggaatattgttggcagcctgatggaagtgggcgccggacaccagccg
gagagctggattgcagagttgctggcagcgaaggaccgaaccctggcagcagcaacggcg
aaagcggaaggactctatctggtctcggttgattacccggatcgttttgaccttccaaaa
ccgccaatgggcccgctgtttttagcggactaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

Download RDF

DBGET integrated database retrieval system