KEGG   Leclercia sp. LSNIH1: C2U54_01600
Entry
C2U54_01600       CDS       T05297                                 
Name
(GenBank) autoinducer 2 ABC transporter substrate-binding protein LsrB
  KO
K10555  AI-2 transport system substrate-binding protein
Organism
lei  Leclercia sp. LSNIH1
Pathway
lei02010  ABC transporters
lei02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lei00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C2U54_01600
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C2U54_01600
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lei02000]
    C2U54_01600
Transporters [BR:lei02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   AI-2 transporter
    C2U54_01600
SSDB
Motif
Pfam: Peripla_BP_4 Peripla_BP_1 RHD_dimer Glyco_tran_WecG
Other DBs
NCBI-ProteinID: AUU82792
Position
complement(296046..297047)
AA seq 333 aa
MKIKLMVLAVALSVASAQAADRIAFIPKLVGVGFFTSGGNGAKEAGKALGTDVTYDGPTE
PSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDTKPECRSIY
INQGTPEQLGGLLVEMASKQVTKPDAKVAFFYSSPTVTDQNQWVNAAKAKIAKDHPQWQI
VTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAAQAAENLKREGVAIVGFST
PNVMRPYVERGTVKAFGLWDVVQQGKIAVNVADRLLKKGDLNVGDSVEIKDIGALKVEPN
SVQGYQYEAKGNGIVLLPERVVFTKENINNYDF
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgaaaataaaactgatggtgctggccgtagcattaagcgttgcctcggcgcaggccgcc
gaccgcattgcgtttatcccgaaactggtgggggtcggcttctttaccagcggcggcaac
ggggcgaaagaggcgggtaaagcgctgggcacggacgtcacctacgatggccccaccgag
ccgagcgtctcggggcaggtgcagctgatcaataacttcgtcaaccagggctataacgcc
attatcgtctccgccgtgtcgccggacggcctctgcccggcgctgaagcgcgccatgcag
cgcggagtgaaagtcctgacctgggattccgacaccaaaccggagtgccgcagcatctac
atcaaccagggaaccccggaacagctcggcggcctgctggtggaaatggcctcgaagcag
gtgaccaaaccggacgccaaagtggccttcttctactccagtcccaccgtcaccgaccag
aaccagtgggtgaacgcggcgaaagccaaaatcgccaaagatcatcctcagtggcagatc
gtcaccacccagtttggctataacgacgccaccaaatccttgcagaccgccgaggggatc
ttaaaagcctacccggatctggatgcgatcatcgccccggatgccaacgccctgccggcg
gcagcccaggcggcggaaaacctgaagcgggaaggggtggcgatagtcggcttcagcacg
ccgaacgttatgcgtccgtatgtggagcgcggcacggtgaaagccttcggcctgtgggat
gtggtgcagcagggcaaaattgcggtcaatgtcgccgatcgtttgttgaaaaaaggcgat
cttaacgtcggcgacagcgtggagatcaaagatatcggcgccctgaaggtcgagccgaac
agcgtgcagggctatcagtatgaagcgaaaggcaacggcattgtgctgctgccggagcgg
gtggtgtttaccaaagagaacatcaacaactacgacttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system