KEGG   Leifsonia sp. PS1209: HF024_16000
Entry
HF024_16000       CDS       T06547                                 
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
leif  Leifsonia sp. PS1209
Pathway
leif00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:leif00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HF024_16000 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:leif01007]
    HF024_16000 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:leif03016]
    HF024_16000 (lysS)
Enzymes [BR:leif01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     HF024_16000 (lysS)
Amino acid related enzymes [BR:leif01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   HF024_16000 (lysS)
Transfer RNA biogenesis [BR:leif03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    HF024_16000 (lysS)
 Prokaryotic type
   Other AARSs
    HF024_16000 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: QIZ99859
UniProt: A0A6H1W8H5
Position
complement(3358032..3359546)
AA seq 504 aa
MTDEQTPEPELSADEISEQKAVRLGKRERLIAEAKTPAGGAYPVAVPITTTIPAVRAKWG
HLQADEVSGETVGVAGRVVHLRNTGKLCFAVLQSGDGTRIQVMVSLAAVGEESLAEWKEL
VDLGDHLFVSGEVISSRRGELSIMVESWTIASKALLPLPNLHNELNEETRVRSRYLDLIA
RDQARKNVIDRAKTVASLRKTFSERDFIEVETPMLQVMHGGASARPFVTHSNAFDTELYL
RIAPELYLKRAVVGGIDHVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDYNSIADLTQT
LIQNAAQAISGSHVVTWADGTEYDLGGEWDRIRMYDSLSEAVGEEITPATSVERLREIAA
VEGIEIQHPLPGKYVEELWEHFVKDTLVRPTFVMDFPVDTSPLVRAHRSREGVVEKWDLY
TRGFELATGYSELVDPVVQRERFVEQAKLAAEGDVEAMRLDEEFLRALEFGMPPSGGMGM
GIDRLLMALTGLGIRETILFPLVK
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgaccgacgagcagacccccgagcctgaactctccgctgacgagatcagcgagcagaag
gccgtccgcctcggcaagcgcgagcgcctgatcgccgaggcgaagactcccgcgggcggc
gcgtacccggtcgctgtgcccatcaccacgaccattcccgccgtgcgcgcgaagtggggc
cacctgcaggccgacgaggtctccggagagacggtcggcgtcgcaggacgcgtcgtgcac
ctccggaacaccggcaagctgtgcttcgcggtgcttcagtccggcgacgggacgcgcatc
caggtgatggtgtcgctcgcggccgtcggcgaggagtcgctggccgagtggaaggaactc
gtcgacctcggcgaccacctcttcgtctccggcgaagtgatctcgagccgccgcggcgag
ctgtcgatcatggtggagagctggaccatcgcatccaaggccctgcttccgctgccgaac
ctgcacaacgagctcaacgaggagacgcgcgtccgcagccgttacctcgacctgatcgcg
cgcgaccaggcccgcaagaacgtcatcgaccgcgccaagaccgtcgccagcctccgcaag
acgttctctgagcgtgacttcatcgaggtggagaccccgatgctgcaggtcatgcatggc
ggggcgtccgcgcgcccgttcgtcacccactcgaacgcgttcgacaccgagctctacctg
cgcatcgcacccgagctgtacctgaagcgcgccgtggtcggcggcatcgaccacgtgttc
gagatcaaccgcaacttccgcaacgagggcgcagactccacgcactcgcccgagttcgcc
atgctcgaagcgtacgaggcgtacggcgactacaactcgatcgccgacctcactcagacc
ctcatccagaacgccgcgcaggcgatctccggttcgcatgtcgtgacctgggccgatggc
accgagtacgacctcggtggggagtgggatcgaattcgcatgtacgacagcctgtccgag
gcggtcggcgaagagatcactcccgcgacatctgtggagagactgcgcgagatcgcggct
gtggaggggatcgagatccagcatcccctgccgggaaagtacgtcgaggagctgtgggag
cacttcgtcaaggacacgctggtgcgaccgacgttcgtgatggacttccccgtcgacacc
agcccgctggtgcgcgcgcaccgttcgcgcgagggcgtcgtggagaagtgggacctctac
acccgcggcttcgagctcgcgaccggatactcggagctggtcgaccccgtcgtgcagcgc
gagcggttcgtcgagcaggcgaagctggccgcggagggcgatgtcgaggcgatgcgtctc
gacgaggagttcctgcgtgctctcgagttcggcatgccgccgtcgggcggaatgggcatg
ggcatcgaccgcctgctgatggcgctcaccggcctcggtatccgcgagacgatcctcttc
ccgctcgtcaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system