KEGG   Leisingera sp. NJS204: ETW24_19560
Entry
ETW24_19560       CDS       T05817                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
lej  Leisingera sp. NJS204
Brite
KEGG Orthology (KO) [BR:lej00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lej03016]
    ETW24_19560
Enzymes [BR:lej01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     ETW24_19560
Transfer RNA biogenesis [BR:lej03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    ETW24_19560
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2 CNOT1_HEAT RNase_T Phage_integrase Imm32
Other DBs
NCBI-ProteinID: QAX31398
Position
4022018..4022632
AA seq 204 aa
MANHLYKNDLPDGLDLGSVVAIDCETMGLNPHRDRLCVIQMSGGDGNAHIVQVEKGQTEA
PNLCRMLEDANVLKLFHFGRFDIAAMHHAFGALAAPVYCTKIASRLVRTYTDRHGLKNLT
QELLAIDISKQQQMSDWGAEELTEAQLEYAASDVLHLHKLRKALDKRLAREGRTGMAQAC
FDFLPMRAKLDLAGWPEIDIFAHS
NT seq 615 nt   +upstreamnt  +downstreamnt
gtggccaaccacctttacaagaacgacctgcccgacgggctggatctcggttccgtcgtc
gcaattgactgcgagacaatggggttgaacccgcatcgtgaccggctttgcgtgattcag
atgtccggcggcgacggcaatgcccatatcgtgcaggtcgaaaagggccagaccgaagcg
cccaacctgtgccggatgctggaagatgcaaatgtgctgaaactgttccacttcggccgc
ttcgatattgccgccatgcaccacgcattcggcgctctcgcggcccctgtctattgcacc
aagatcgccagccgactggtccgcacatacactgaccggcacgggttgaagaacctgacc
caggaactcttggccatcgacatatcaaaacagcagcagatgagcgactggggcgcagag
gaactgaccgaagcacagcttgagtatgccgcctccgacgtgctccacctgcacaagctg
cgcaaggcgctggacaagcgcctggcccgcgagggccgcaccggaatggcgcaggcctgc
tttgacttcctccccatgcgtgccaagctggatctggccggctggcccgaaatcgacatc
tttgcgcactcatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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