KEGG   Leclercia sp. Colony189: GNG29_22830
Entry
GNG29_22830       CDS       T06321                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ler  Leclercia sp. Colony189
Pathway
ler03030  DNA replication
ler03410  Base excision repair
ler03420  Nucleotide excision repair
ler03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ler00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GNG29_22830 (polA)
   03410 Base excision repair
    GNG29_22830 (polA)
   03420 Nucleotide excision repair
    GNG29_22830 (polA)
   03440 Homologous recombination
    GNG29_22830 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ler03032]
    GNG29_22830 (polA)
   03400 DNA repair and recombination proteins [BR:ler03400]
    GNG29_22830 (polA)
Enzymes [BR:ler01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GNG29_22830 (polA)
DNA replication proteins [BR:ler03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GNG29_22830 (polA)
DNA repair and recombination proteins [BR:ler03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GNG29_22830 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GNG29_22830 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH HHH_5
Other DBs
NCBI-ProteinID: QGW19221
Position
complement(4786158..4788950)
AA seq 930 aa
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPSHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAVSGVEADDVIGT
LAREAEKMGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVAKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYSEQDKIAGLTFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELDLTCEQLEVEQPAVEELLGLFKQYEFKRWITDVEAGKWLQAK
GAKPAAKPKETLVIDAEEEPEEEASVLSSEHYETILDEAQLQRWIEKLHQAPVFAFDTET
DSLDNVSANMVGLSFATEPGVAAYVPVAHDYLDAPEQLTRERVLELLKPILEDEKALKVG
QNLKFDRGILQNYGIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTVTFEQIAG
KGKNQLTFNQIALEEAGHYAAEDADVTLQLHLKMWPKLQKHAGPLNVFQNIEMPLVPVLS
RIERNGVKIDPAVLHKHSEEIALRLHELEQKAHEIAGEPFNLSSTKQLQTILFEKQGIKP
LKKTPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTS
YHQAVAATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS
RDKGLLTAFAEGQDIHRATAAEVFGMPLESVTGEQRRSAKAINFGLIYGMSAFGLSRQLN
IPRKESQKYMDLYFERYPGVLQYMENTRAQAKEKGYVETLEGRRLYLPDIKSSNAARRAG
AERAAINAPMQGTAADIIKRAMIAVDAWLEKEQPRVRMIMQVHDELVFEVHKDDLEPVSK
KIHELMENSVKLDVPLLVEVGRGENWDQAH
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggttcagatccccgaaaatccgcttattctcgtcgacggctcgtcttacctctatcgg
gcatatcacgcatttcctccgctgaccaacagcgcaggagagcctacgggcgcaatgtat
ggtgtgctgaacatgctgcgtagcctgatcatgcagtatcagccaagccatgccgccgtg
gtcttcgatgcgaaaggcaaaactttccgggatgagctgttcgagcattacaaatctcat
cgtccgccgatgccggacgatctgcgcgcgcaaattgagcctctgcataagatggtaaaa
gcgatggggctgcctttgatggccgtctcgggcgttgaagcggacgatgttatcggtacg
ctggcgcgtgaagcagagaaaatgggccgcccggtcctgatcagcaccggcgataaagac
atggctcagctggtcacgccggggatcaccctgattaacaccatgaccaataccattctt
gggccggaagaggtcgtcgctaagtatggcgtgccgccggaactgatcatcgacttcctc
gcgctgatgggtgactcctccgataacattcctggcgtaccgggcgtgggcgaaaagacg
gcccaggcgctgctgcaaggtctgggcgggctggatacgctgtatagcgagcaggataaa
atcgccgggctgaccttccgcggtgccaaaaccatggccgctaagcttgagcagaacaaa
gaggtggcctacctctcttatcagctggcaaccatcaaaacagacgtcgagctggatctg
acctgtgaacagcttgaagtggagcaacctgccgttgaagagctgctaggcctgtttaag
cagtacgagttcaaacgctggataaccgatgtcgaagcggggaaatggctgcaggcgaaa
ggggctaaaccagcagctaagccaaaagagaccctggtgatcgatgcagaagaggagccg
gaagaagaagccagcgtgctctcttctgagcattacgaaaccattctggatgaagcgcag
ctgcaacgctggattgaaaagttacaccaggcaccggtattcgctttcgataccgaaacc
gacagcctcgataatgtctccgccaatatggtggggctgtcatttgccacagagccgggc
gttgccgcctatgtgccggttgcccacgactatctggacgcgccagagcagcttacccgt
gagcgcgtgctcgaactccttaagccgatccttgaagatgaaaaagcgctgaaggtaggg
caaaacctgaagttcgatcgcggtatcctgcaaaactacggtatcgaactgcgcggcatt
gcgttcgataccatgctggagtcctatatcctcgacagcgtcgccggtcgtcacgatatg
gattcgctctccgaccgctggctgaagcataaaaccgtcacctttgagcagatcgccggt
aagggcaagaatcagctgacctttaaccagatcgccctggaagaggcggggcactatgcg
gcagaagacgctgacgtcacgctgcaactgcatttaaagatgtggccgaagctgcaaaaa
cacgccgggccactgaacgtgttccagaatatcgagatgccgctggtgccggttctgtcc
cgcatcgagcgcaatggcgtgaaaatcgatccggctgtgttgcacaagcactcagaagag
atcgccctgcgtctgcacgagctggaacaaaaagcgcatgagatcgccggcgagccgttt
aatctgtcgtccactaaacagctgcagaccatcctgtttgaaaagcagggtatcaagccg
ctgaagaaaacgccgggcggggcgccgtccacctctgaagaggtgcttgaggagctggcg
ctggactatcctctgccaaaagtgatccttcagtatcgtgggctggcaaagctaaaatcg
acctacaccgataagctgccgttgatgatcaacccaaaaacgggccgtgtacacacctct
taccatcaggcggtagcggctaccgggcgactctcctcaaccgatcctaacctgcaaaac
attccggtgcgtaatgaagaagggcgccgtatccgtcaggcgtttattgcgccagaggat
tacgtcatcgtctctgctgactattcacagattgagctgcgcatcatggcgcacctctcc
cgggataaagggctgttgaccgcctttgctgaagggcaggatattcaccgggccacggca
gccgaagtgtttggtatgccactggagagcgtcaccggggaacagcgccgcagcgcgaag
gcgatcaactttggccttatctacggcatgagcgcctttggcctctcccgccagctcaat
attccgcgcaaagagtcgcagaagtatatggatctctatttcgagcgctacccgggcgtg
ctgcaatatatggagaacacgcgcgcccaggcaaaagaaaaaggctatgtcgaaaccctg
gaagggcgtcgcctctatctgccggacatcaaatccagtaatgcggcccgccgtgccggt
gccgaacgtgcggcaatcaacgccccgatgcaggggacggcggcagatatcatcaaacgt
gcaatgatcgccgttgacgcctggctggagaaagagcagccgcgagtgcggatgatcatg
caggtacacgatgaactggtgtttgaggtgcataaagacgatctggaaccggtctcgaaa
aagatccatgaactgatggagaacagcgtcaaactggatgtgccgttgctggtggaagtc
ggccggggagaaaactgggatcaggctcactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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