KEGG T05398: DAI21

Lelliottia sp. WB101: DAI21_18905

Entry

DAI21_18905       CDS       T05398

Name

(GenBank) 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI

K06969

23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]

Organism

lew Lelliottia sp. WB101

Brite

KEGG Orthology (KO) [BR:lew00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lew03009]
    DAI21_18905
Enzymes [BR:lew01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     DAI21_18905
Ribosome biogenesis [BR:lew03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DAI21_18905

SSDB

Motif

Pfam:

Methyltrans_SAM PUA_3 Cons_hypoth95 Methyltransf_31 MTS Methyltransf_15 Methyltransf_25 PrmA Methyltransf_11 Met_10 TRM PUA Spermine_synth Methyltransf_12 Methyltransf_10 Methyltr_RsmB-F

Other DBs

NCBI-ProteinID:

AVY99574

Position

3879460..3880650

AA seq 396 aa
MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVDHQGKWLARGAYSPASQ
IRARVWSFDKDETIDIAFFTRRLQQAQEWRDWLAKRDGLDSYRLIAGESDGLPGVTIDRF
GNFLVLQLLSAGAEYQRAALISALQGLYPDCAIYDRSDVAVRKKEGMELTQGPVTGALPP
ALLPIEEHGMKLYVDIQGGHKTGYYLDQRDSRLATRQYVANKRVLNCFSYTGGFAVSALM
GGCSQVVSVDTSQEALDVAKQNVELNKLDLSKAEFVRDDVFKLLRKYRDQGEKFDVIVMD
PPKFVENKSQLMGACRGYKDINMLAIQLLNPGGILLTFSCSGLMTTDLFQKLIADAAVDA
GRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM

NT seq 1191 nt +upstreamnt +downstreamnt
atgagtgtacgtttagtgttagccaaagggcgcgagaaatcattattgcgccgtcatccc
tgggtgttttctggtgccgttgcccgcatggaagggaaagccagcctcggtgaaaccatc
gatattgttgaccatcaggggaaatggttagcgcgcggcgcatactcgcctgcctcacag
atccgtgcgcgcgtctggagctttgataaagacgaaaccatcgatatcgccttcttcacc
cgccgtttacagcaggcgcaggagtggcgtgactggctggcgaaacgtgacgggctggac
agctatcgactgattgccggcgagtccgacggtctgccgggcgtgaccatcgaccgcttc
ggcaacttcctggtgcttcagctcctgagcgcaggcgcagagtatcagcgcgccgcgtta
atcagtgccctgcagggcctttaccctgactgcgctatttacgatcgcagcgatgttgcg
gtgcgtaaaaaagagggaatggagctgacgcaaggtccggtcaccggtgcactgccgcct
gccctgctgcccattgaagagcatggtatgaagctgtacgtcgacatccagggtggccat
aaaaccggctattacctcgatcagcgcgacagccgcctggcgacgcgccagtacgttgcg
aataaacgcgtgctgaactgcttctcctacaccggcggatttgccgtttcggcactgatg
ggcgggtgcagccaggtggtcagcgtcgacacctcgcaggaagcgctggacgtggcgaaa
cagaacgttgagctgaacaagctggatctgagcaaagccgaatttgtccgcgatgacgtg
ttcaagctgctgcgcaaataccgcgatcagggggagaaattcgatgtcatcgtgatggac
ccgccgaagttcgtggaaaacaaaagccagctgatgggcgcctgccgtggctataaagac
atcaacatgcttgccattcagttgctcaatccaggcggcattttgctgaccttctcctgc
tcaggcctgatgaccaccgatttatttcagaaactgatcgcagatgccgctgtagatgcg
ggccgtgatgtacaatttatagagcagttccgtcaggcggccgatcatccggtgatcgct
acctacccggaagggctgtatctcaaagggtttgcctgtcgcgtcatgtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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