KEGG T05304: C1X05

Laceyella sacchari: C1X05_10915

Entry

C1X05_10915       CDS       T05304

Symbol

rsmD

Name

(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD

K08316

16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]

Organism

lfb Laceyella sacchari

Brite

KEGG Orthology (KO) [BR:lfb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lfb03009]
    C1X05_10915 (rsmD)
Enzymes [BR:lfb01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.171  16S rRNA (guanine966-N2)-methyltransferase
     C1X05_10915 (rsmD)
Ribosome biogenesis [BR:lfb03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    C1X05_10915 (rsmD)

SSDB

Motif

Pfam:

Cons_hypoth95 MTS Methyltransf_31 MethyltransfD12 Methyltransf_25 Methyltransf_15 TRM Methyltrans_SAM Methyltransf_24 UPF0020 Met_10 PrmA Methyltransf_3 CCDC90-like Hemagglutinin

Other DBs

NCBI-ProteinID:

AUS09279

Position

complement(2240620..2241192)

AA seq 190 aa
MRIIAGNRKGTRLKMVPGQHVRPTADRVKESLFSVIGPFFDGGYALDLFAGTGSLGLEAL
SRGMERAFFVDQSRTSCETVRANAALAKLSEQVEIMRRDARAALKTLNERGIQFDIIFLD
PPYHKQLLIPALTEIAELGLVAEEGVVVAEHPSQASMPEKVGRLTSFRSLSYGDVAMTLY
TPEEKEGENT

NT seq 573 nt +upstreamnt +downstreamnt
atgcgaattattgctggcaaccgcaaaggcacgcggctgaaaatggtgccaggccaacat
gttcgaccgacggctgaccgtgtgaaggaatcgctgttttcggtgatcggtccgtttttc
gacggcggatacgccctcgatttgtttgctgggacgggttcattgggtttggaagcgctt
agccggggaatggagcgcgctttttttgtggaccaatctaggacaagttgcgagacggtc
agagcgaacgcagcgttggcgaagttgtcggagcaagtggaaatcatgcgccgagacgct
agggcggcattaaaaaccttgaacgaacgaggcattcaatttgacatcatttttctcgat
ccgccttaccacaaacaattgctcattcccgctttgacggagatcgccgagcttggtttg
gtggcggaggagggggtggtggtggcggagcacccaagccaagcctccatgcctgaaaag
gttgggcgactgacttcttttcgtagcttgtcctatggcgacgtggcgatgacgttgtat
actccggaagagaaagaaggggaaaacacatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (34)   

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