KEGG   Leptospirillum ferrooxidans: LFE_0216
Entry
LFE_0216          CDS       T01809                                 
Name
(GenBank) putative zinc-binding cytidine/deoxycytidylate deaminase
  KO
K11991  tRNA(adenine34) deaminase [EC:3.5.4.33]
Organism
lfc  Leptospirillum ferrooxidans
Brite
KEGG Orthology (KO) [BR:lfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lfc03016]
    LFE_0216
Enzymes [BR:lfc01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.33  tRNA(adenine34) deaminase
     LFE_0216
Transfer RNA biogenesis [BR:lfc03016]
 Prokaryotic type
  tRNA modification factors
   Deaminases
    LFE_0216
SSDB
Motif
Pfam: MafB19-deam dCMP_cyt_deam_1 Bd3614-deam SNAD4 DUF2162 APOBEC2 NAD1 APOBEC3
Other DBs
NCBI-ProteinID: BAM05941
UniProt: I0IKZ2
Position
complement(211728..212207)
AA seq 159 aa
MSQFEKDQYFMELAISEAEKAVLIDEVPVGAVLLLGDKVLSTAHNARISTFDPTGHAEIL
AIRKAAQTIKNYRLTGASLYVTVEPCPMCFGAIMEARVTEVVFSVREPRSGVMGSLYDLQ
NDPRWSHKIIVREGILDGPVQELLRNFFLKKRLGPQDHL
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcacaattcgaaaaagatcagtattttatggaattggcgatttcagaagcagaaaaa
gctgtcctgatcgacgaagtcccggttggagccgttcttttattgggagacaaggtcctt
tcgactgctcataacgctcgcataagtacctttgacccaacaggacacgccgaaatactt
gcaattcgaaaagctgcccagacaatcaaaaattacaggctcactggagcctccctttac
gtcactgtcgaaccttgcccaatgtgctttggagcgatcatggaagccagagtcacagaa
gttgtcttttctgtcagggaaccccgatccggagtcatgggctctttgtatgacctccaa
aacgacccaagatggtctcataaaattattgtccgggaaggtattctcgatggacctgtt
caagaactgcttcgaaatttttttcttaaaaaacgtttgggaccacaagaccatctatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system