KEGG   Leptospirillum ferrooxidans: LFE_0859
Entry
LFE_0859          CDS       T01809                                 
Name
(GenBank) putative ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
lfc  Leptospirillum ferrooxidans
Brite
KEGG Orthology (KO) [BR:lfc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lfc03009]
    LFE_0859
Enzymes [BR:lfc01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     LFE_0859
Ribosome biogenesis [BR:lfc03009]
 Prokaryotic type
  ribosomal protein modification factors
   LFE_0859
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 TRAM
Other DBs
NCBI-ProteinID: BAM06568
UniProt: I0IMR9
Position
846181..847551
AA seq 456 aa
MDSKNIIEKTVNIVSLGCPKNLVDTENMINDLESRGYKIIPDAEKAEIILVNTCSFVTDA
RKESIDTLLDLSRYKEEGNAKLLVGTGCLISRYKDTLPNLLPEVDVMLSTFEESRLGELL
DGLSQPNVKKNNTTELIIPQSIPFREKRLTPRHRAYVKISEGCDHTCTFCSIPLSRGPQI
SRKPEDILSEITRLGNEGVEEITLIAQDLTRYGSDLGLKDGLADLLLMIDRLNKVSWVRL
LYAYPTLVTDRLLDVIRDSPSIVKYLDIPLQHVNGEVLRRMERPGNIDSSRRLISRIREK
VPGISLRTTFIVGFPGETDEEFQELMSFVKWANFDHLGVFSFSREEGTPSYNMDGQIPAR
IKNQRRNQVMALQKKISFEKNKSYVGKVVPVLIEGPSEQSPLVLSGRIATMAPDLIDGEV
LVLSGSASVGEIVECCITKAHPYDLEAWEISVPPIV
NT seq 1371 nt   +upstreamnt  +downstreamnt
gtggattcaaaaaatattatagagaagactgtaaatattgtcagtctcgggtgtccaaaa
aacttggttgatactgaaaatatgataaatgatcttgagtcgagaggctacaagattatt
cctgatgctgaaaaagctgaaattattttagtcaatacttgtagttttgtaaccgatgct
aggaaggaatcaatagatactcttttagatttatctagatataaggaagaagggaacgct
aagctattggttggtactgggtgcttgatttctcgctataaagatacattgccgaacctt
cttccagaggttgatgtaatgttatcaacattcgaggaatcacgtttgggagagcttctt
gacgggttatctcaacccaacgtcaaaaaaaataatactaccgagttgattattccccaa
tctattccttttagggaaaagcgtctcactcctagacatagggcttatgtaaaaatttct
gaaggatgtgatcacacttgtaccttttgttctattccattatccagaggccctcaaatt
agtaggaagccagaggatattttaagtgagattactcgcttgggaaacgagggtgttgaa
gagatcaccctgattgcgcaagatttgacccgatatggttcagaccttgggttgaaggat
ggccttgctgacttattgttaatgatcgataggttaaataaggtttcttgggtgagactt
ttatatgcttatccaacacttgtaacggatcgcctcctagatgtcattagggattctcct
tctattgttaaatatcttgatatacctttacaacatgtcaatggagaggttctcaggagg
atggaacgtcctggaaatatagactctagcaggcgacttatatcacgtattcgggaaaaa
gtaccaggtatttctttaaggacaacttttattgttgggttcccgggtgaaactgatgag
gagttccaagagttgatgtctttcgttaaatgggccaactttgaccatttgggtgttttt
tctttttctagggaggaaggtaccccatcttataacatggacggacaaattcctgccaga
ataaaaaaccagcgcaggaatcaggtgatggctctccaaaagaaaatatcatttgaaaaa
aataagagttatgtggggaaagttgttcctgttttaatcgaagggccttctgagcagtcc
cctctggtcctttcggggcgaattgcgacaatggcgcctgatttgattgatggggaagtg
cttgttttgagtggttctgcttcagttggtgaaattgttgaatgttgtattacgaaagct
catccttacgacttggaagcttgggagatttccgttcctccgattgtttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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