KEGG   Leptospirillum ferrooxidans: LFE_1900
Entry
LFE_1900          CDS       T01809                                 
Name
(GenBank) putative DNA polymerase III
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
lfc  Leptospirillum ferrooxidans
Pathway
lfc03030  DNA replication
lfc03430  Mismatch repair
lfc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lfc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LFE_1900
   03430 Mismatch repair
    LFE_1900
   03440 Homologous recombination
    LFE_1900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lfc03032]
    LFE_1900
   03400 DNA repair and recombination proteins [BR:lfc03400]
    LFE_1900
Enzymes [BR:lfc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LFE_1900
DNA replication proteins [BR:lfc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LFE_1900
DNA repair and recombination proteins [BR:lfc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LFE_1900
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_16 DNA_pol3_delta SLFN-g3_helicase
Other DBs
NCBI-ProteinID: BAM07578
UniProt: I0IQM9
Position
1941855..1942835
AA seq 326 aa
MIIGHEKIRSRLDGLIERPEIAATFLFSGPEGVGKMLLAREWAKKILCLGGNCNQKPCES
CRIFHAETQNHPDLIILSTSSEGQSGSRRSLKEEEESSTIKIDKARAFMVELSNAPLVSN
RRVAIVDSAHLLTTQAANSLLKTLEEPPPATMIVLVTHLPDHLPQTIRSRCLNVSFAPLS
LPEFKAVLEQIGLKTEMAPEDLYHLASGAPGQAESQCLPSRTRSLEASKRLFSAIKKPAT
SLFSELSVMLEDPDEDFFLNSLERYLLDLYRQEGKDPENRPFTIDPIKREMLHDKLLEIR
TMSAYNIHRAMNAEEVLLEFREIFGA
NT seq 981 nt   +upstreamnt  +downstreamnt
ttgatcatcggccatgaaaagatccggagccggctggacggcctcatcgaacggcccgag
atcgcggcgacattcctgttctctggtcccgaaggggttggaaagatgcttttggcccgg
gagtgggccaaaaagatcctgtgtctcggtgggaattgtaaccaaaaaccatgcgagtcc
tgccgcatttttcatgcggaaacgcaaaatcatcctgacctgatcatcctttccacatcc
tcagagggacaatccggctccagaagatccttgaaagaggaggaagaatcctcgaccatc
aagatcgacaaagcccgagcctttatggtcgaactctcgaacgcaccgcttgtttccaac
cggcgtgtagcaattgtcgattcggctcatctattgacgacccaggcagcgaacagtctc
ctgaaaacactggaggagcctcctcctgcgacaatgatcgtcctggtcacacatcttccg
gaccatcttccccaaaccatacgctcccgctgcctgaatgtttcctttgccccgctttcc
ctcccagagttcaaggccgttctcgaacagatcggcctgaagaccgaaatggcgccggag
gacctgtaccacctggcatcgggtgcgcccggacaggctgaatcccagtgccttccatca
aggacccgttcacttgaagcttcaaagcggcttttttccgcgatcaaaaagccggcaacc
tctcttttttccgaactttcggtcatgcttgaggatccggatgaggacttcttcctgaac
agtctcgaacgataccttctggatttataccgccaagaaggaaaagatcctgaaaatcgg
cctttcacaatcgaccctatcaagagagagatgcttcatgataagcttcttgagataagg
accatgtctgcttacaatatccatcgggcaatgaatgccgaggaggtacttcttgagttt
cgagaaatcttcggagcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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