KEGG   Leptospirillum ferriphilum ML-04: LFML04_2317
Entry
LFML04_2317       CDS       T02319                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
lfi  Leptospirillum ferriphilum ML-04
Pathway
lfi00300  Lysine biosynthesis
lfi00470  D-Amino acid metabolism
lfi01100  Metabolic pathways
lfi01110  Biosynthesis of secondary metabolites
lfi01120  Microbial metabolism in diverse environments
lfi01230  Biosynthesis of amino acids
Module
lfi_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:lfi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LFML04_2317
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LFML04_2317
Enzymes [BR:lfi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     LFML04_2317
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AFS54507
UniProt: J9ZFV2
Position
complement(2195664..2196908)
AA seq 414 aa
MNGFEYKGHELFVEDVPVRKIVSSVDSPVYIYSEKALREAYSSYQQAFQGHRTLIAYAMK
ANGNLQILSMLGKMGSGADVVSGGELFRARRAGIPSDRIVFAGVGKTDGEMREAIDAGIL
MFNVESSMELDRLSRVASSMGKVAPVALRVNPDVDPKTHPYISTGMKKSKFGIPVDQALE
EYRRAARLPGIRIVGIHQHIGSQLTEISPFRDAFDRMVAFARLLKENGIEVTWLDVGGGL
GIRYGNEKPPTPREVAHEILSRLEGLNVGIILEPGRSIVGNAGILVTEVQYLKETSVKMF
YIADAGMNDLIRPSLYGAFHDLWPVVKKTGAGKKGDLVGPVCETGDFLVQDRELPPAEPG
DLLAVMSAGAYGFAMASNYNARPRPAEVLVSGDRFSVIRARETYEDLIRGEGIV
NT seq 1245 nt   +upstreamnt  +downstreamnt
ttgaacggatttgaatataagggtcatgaactttttgtagaagatgtgcctgtcagaaaa
attgtttcttctgtggactcccctgtgtatatatacagcgaaaaagcgttgcgggaagct
tattcttcctatcagcaggcatttcagggccatcggacgctgattgcctatgcgatgaaa
gccaacggaaatcttcagatcctctccatgctcgggaaaatgggctcgggggcggatgtt
gtttccggaggagagcttttccgggcccggagagcggggattccttccgaccggatcgtc
tttgccggggtgggaaaaacggatggagaaatgagggaagccatcgacgccggaattctg
atgtttaatgtggaatcctccatggaacttgaccgtctctcccgcgtggcgtcttccatg
gggaaagttgctccggtggctcttcgggtcaacccggatgtcgatccgaaaacccacccg
tacatctcgaccgggatgaagaaaagcaaattcggaataccggtggaccaggccctggag
gaatatcggagggctgctcgtctccctggaatccgtatcgttggcattcatcagcacatc
ggctcccagttgacggaaatatcccccttccgggatgcctttgaccggatggtcgctttt
gcccgcctcctgaaagaaaacggtattgaggttacctggctggatgtcgggggaggcctg
ggcatccggtatggcaacgaaaaaccgccgacaccccgggaggtggcccatgaaattctc
tcccgcctggaaggcctgaatgtgggaattatcctggagccggggcgttccatcgtggga
aatgcaggaatccttgtcacagaggtccaatatctcaaagagacttctgtcaagatgttc
tatattgcggacgcggggatgaatgacctcatccgtccttccctctatggtgcgtttcac
gacctctggccggtggtaaagaaaacgggagcagggaagaagggagatctcgttggaccg
gtctgtgaaacgggagacttccttgtccaggaccgggaacttcctcctgcggagcctggt
gatctgttggccgtcatgtcagccggggcctatggatttgccatggcttcaaactacaat
gcgcgccccagaccggcggaggttctggtttcgggagaccgtttttcggtcatacgcgcc
cgtgaaacgtatgaggatttgatccggggagaagggattgtctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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