KEGG   Leptospirillum ferriphilum YSK: Y981_01355
Entry
Y981_01355        CDS       T03197                                 
Name
(GenBank) RNA polymerase sigma factor WhiG
  KO
K02405  RNA polymerase sigma factor FliA
Organism
lfp  Leptospirillum ferriphilum YSK
Pathway
lfp02020  Two-component system
lfp02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lfp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Y981_01355
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Y981_01355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lfp03021]
    Y981_01355
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:lfp02035]
    Y981_01355
Transcription machinery [BR:lfp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Y981_01355
Bacterial motility proteins [BR:lfp02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Y981_01355
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_23 KORA HTH_Tnp_ISL3 LacI HTH_3 Sigma70_ECF MarR_2 HTH_24
Other DBs
NCBI-ProteinID: AIA29958
UniProt: A0A059XT17
Position
239078..239833
AA seq 251 aa
MPMDLDEDTLKEFAVTVKFFALRYSHRLPPELDVDDLISAGMGGLLDAARRFDPSRGIKF
KTLAEHRIRGAMLDEIRAADWMPRSVREKLTHVQQVKTELIARYKREPTRQEIAARMDMT
EEEFDRLSVDIEPHHLVSLEDLMDPEDGDSPSLLDRLSAPQEGDPLASLLQSEVSEKLCQ
ALDRLPEKQRLVLSLYYYEELTMKEVARVVGVSESRVSQIHGQALAALKQSLVETSETEN
VSSRQTVRHGG
NT seq 756 nt   +upstreamnt  +downstreamnt
atgccgatggatcttgatgaagacacactgaaagaatttgctgtcacggtcaagttcttt
gcgctccgctattcccatcgcctgcctccggaactggatgtcgacgatctgatcagtgcc
ggtatgggagggcttctggatgctgcccggcggttcgacccttcccgcgggatcaagttc
aagacgttggcggagcaccggatccggggggcgatgctcgatgaaatccgcgcggcggac
tggatgcctcgctccgtccgggagaagctgacccatgtgcagcaggtgaagaccgagctg
attgcccgctacaaacgcgagccgacccgccaggagatcgcggcccgcatggacatgacg
gaagaagagttcgaccgcctgtcggtcgacatcgagccccatcatctggtgagtctcgaa
gacctgatggatccggaggacggcgacagcccctctctcctcgaccgtctgtcggcaccc
caggaaggggatccgttggccagccttctccagagcgaggtgtccgagaagctctgccag
gcgctcgaccggcttccggaaaaacagcgtcttgtcctgtccctgtattactacgaagag
ctgacaatgaaagaggtcgcgcgggttgtgggcgtcagcgaatcccgggtgtcccagatc
cacgggcaggctcttgccgcgctgaaacaatctcttgtcgaaacctctgaaacggaaaac
gtctcttcccggcagacggtccgtcatggtggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (23)   

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