KEGG   Leptospirillum ferriphilum YSK: Y981_03650
Entry
Y981_03650        CDS       T03197                                 
Name
(GenBank) UDP-N-acetylmuramyl tripeptide synthase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
lfp  Leptospirillum ferriphilum YSK
Pathway
lfp00300  Lysine biosynthesis
lfp00550  Peptidoglycan biosynthesis
lfp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lfp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Y981_03650
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Y981_03650
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:lfp01011]
    Y981_03650
Enzymes [BR:lfp01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Y981_03650
Peptidoglycan biosynthesis and degradation proteins [BR:lfp01011]
 Precursor biosynthesis
  Amino acid ligase
   Y981_03650
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: AIA30192
UniProt: A0A059XY97
Position
651655..653184
AA seq 509 aa
MRHDRPTHDKHWLSLNLPPPVCGRFPEKVLSLSDDSRQVENGALFLIRPGEGFRWEFVDE
ALDRGASYLVADRKAFPEIDSRPALSSRIREFAGLSLVENLPRAVGQLASSWWGFPSSFL
KVIGVTGTNGKTTSSFLTRSVCRAGGLPCGLIGTVVFDVGHEETEAPQTTPGAIRIQSLF
AESLRNGLKSVSMEVSSHALDQDRLAGTNFSVVHFTNLTRDHLDYHRTMEAYFEAKRKLL
MWENPDGSHPVAVVHTGDEYGARLAKELERDGRRVLTYGEGADAMIRPLRVDVGLSGIRG
TLRTSRGEMSIDSSLSGHYNLQNILGAVGCGEALGLSMEKIAEGIHSLPGVPGRFERVDS
PTGFSVIVDYAHTDDALSNLLSAVRPVTRGKVITVFGCGGDRDRGKRPRMGSVAGRLSDF
VVLTSDNPRTENPESILDEIEPGLRETGTPYVRVSDRKSAIFEAIRRARPGDAVVIAGKG
HENYQILGKQKIHFDDREIARLALAESSR
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgagacacgacagacccacgcatgacaaacactggctgtccctgaatcttcctcctccc
gtttgcgggcgttttccggagaaggttctgagcttgtccgacgattcccgccaggtcgag
aacggtgcgctttttctgatccggccgggagaagggttccggtgggaatttgtcgatgaa
gcgctggaccgcggagcctcctatctggtggccgaccggaaagcgttcccggagatcgac
agtcgaccggctctttcctccagaattcgtgaattcgccgggctgtcactggtggagaac
cttccccgggcggttggccagctggcgtcttcctggtggggcttcccttcctctttcctg
aaagtgatcggtgtcacggggaccaacgggaaaaccacatcgagtttcctgacgcgctct
gtttgccgtgccggaggattaccctgcggtctgatcggaactgtcgtttttgatgtcggc
catgaagagacagaggcgccgcagacgactcccggtgccatacggattcaatccctgttt
gcggaatctctccggaacggactgaagtccgtttcgatggaagtttcctcgcacgcgctc
gatcaggatcgtctggccggaacgaatttttccgttgtccattttacgaatctgacccgg
gatcatctcgattatcaccggacgatggaagcctattttgaagcgaaaagaaagctcctg
atgtgggaaaacccggatggaagccatccggtggccgtcgtgcatacgggagatgagtat
ggggccagactggcgaaagagcttgaacgggatgggcgccgggtcctgacctatggggag
ggagcggatgccatgatccggccccttcgtgtcgacgtcggtctgtcgggaatccgggga
actcttcggacgagccggggagaaatgtccattgattcctccttgtccggccattacaac
ctccagaatattctgggcgctgtcggctgcggtgaggcgctcgggctctccatggaaaaa
atcgcggaagggattcattccctccccggtgttccgggacgttttgaacgcgtggacagt
ccgacgggattttcggtgatcgtggactatgcgcatacggacgacgctctttcgaacctt
ttgtccgccgttcgcccggtgacccggggaaaggtcatcaccgttttcggctgcggcggg
gatcgggatcggggaaaacgccctcgcatggggagcgtcgccggccgtctttccgatttt
gttgtcctgacatcggacaatccccgaacggaaaatccggaatcgatcctggatgaaata
gagccgggacttcgggagacgggaaccccctatgtccgggtttccgaccgaaaatccgcg
atctttgaggccattcgtcgggcccgccccggagatgcggtcgtgatcgccggaaaaggg
cacgagaactaccagattctgggaaagcaaaaaatacacttcgatgatcgggaaattgcc
cgtctcgccctcgcggagagctcccgttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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