KEGG   Leptospirillum ferriphilum YSK: Y981_05250
Entry
Y981_05250        CDS       T03197                                 
Name
(GenBank) DNA-directed RNA polymerase subunit sigma-24
  KO
K03092  RNA polymerase sigma-54 factor
Organism
lfp  Leptospirillum ferriphilum YSK
Pathway
lfp02020  Two-component system
lfp02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lfp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Y981_05250
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Y981_05250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lfp03021]
    Y981_05250
Transcription machinery [BR:lfp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Y981_05250
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_36 HTH_38
Other DBs
NCBI-ProteinID: AIA30391
UniProt: A0A059XYM2
Position
965051..966511
AA seq 486 aa
MIRQRLEIKLGQKMVMTPQLQQAIHLLMLAKLDLREEILQETQTNPLLELEEEGDWEDSV
PESSIDHLPADSENRETVPEEETNPDPLMSWDYSLHEDMDDSGLYQEERSIREDPESDFS
YEKVLAAPTTLEDHLIWQISFREMSPVEKELAHFLIGNINEDGYLAVSEEEIPESLRTDP
EMFPRVLSWIQECDPPGVGARNLRECLMIQARMLHLEKTVVWSVLESHLDEFMEMKYKGI
ARALSVSVEDIQEAGKIIRKLEPKPGRPYFRDMAMPISPDVRFYDAGHGEIRVGLNEEGV
PRLRIQSAYKSLLKTMEKKDKTREYIEEKLRSAMWFMKSIEQRKKTILRVAEAILRHQED
FFRRGPLGLKPLVLKTIAQDLGLHESTISRVTNQKYAETPFGIVELKFFFSGGLPSQSGS
EHSSVSVREKIRDMVHGESKSAPLTDQEIMNRLGKEGIVIARRTVAKYRMELDIPPVNKR
KQERAV
NT seq 1461 nt   +upstreamnt  +downstreamnt
ttgattcgccaacgtctggagataaagctcggccagaagatggtgatgactccccagctc
cagcaggccattcatcttttgatgcttgcgaagctggacctgagagaggaaatcctgcag
gaaacccagaccaatccacttctcgaactggaagaagaaggcgattgggaggattcggtt
cccgaaagctcgatcgatcaccttccagccgacagcgagaaccgcgagaccgttccggaa
gaagagacgaatcctgacccgttgatgagctgggactactcccttcatgaagacatggac
gactccgggctttaccaggaggaacgctccatccgggaagacccggaaagcgatttttcc
tatgagaaggttctggctgctccgacgactctggaagaccatctcatctggcagatttcg
tttcgggagatgtctccggtggagaaagagctggcacattttctgatcggaaacatcaat
gaggatggttatctcgctgtttcggaagaggaaatccccgaatccctgaggacagacccc
gagatgtttccccgtgttctctcctggatccaggagtgcgaccctccgggcgtgggggct
cgaaacctgagggagtgtctgatgatccaggctcgtatgctgcatcttgaaaagacggtt
gtctggtctgttctggaaagccatctcgatgagttcatggaaatgaaatacaagggaatt
gccagggcgctttctgtttccgtggaggatattcaggaagcgggaaaaatcattcgaaag
ctggagcccaaaccggggcgaccctattttcgggatatggcgatgcccatctctcccgat
gtccggttttatgatgccggacatggagaaattcgtgtgggtctgaatgaagagggggta
ccgaggttaagaattcaatcggcttataagtctcttctcaaaacgatggaaaaaaaggat
aagacacgggagtatattgaagaaaagctgcgatcggcgatgtggtttatgaagtcaatt
gagcagcgaaagaaaacgattttacgggttgcggaagcaattttgcgccaccaggaggat
ttttttcgtcgggggccgcttggcctcaagccacttgtgctgaaaacgattgcgcaggat
ctcgggttgcatgagtcgacgatttcccgggttacgaaccagaaatatgccgaaacccct
ttcggcattgtggaactcaagttctttttttccggagggttgccgtctcagtccgggtcg
gaacattcgtctgtcagtgtaagggaaaaaattcgcgacatggttcatggagagtccaag
agtgcgccactgacggatcaggaaatcatgaaccgtctggggaaggaagggatcgtcatt
gccaggaggactgtcgccaagtaccggatggaactcgatattcccccggtcaacaagcgc
aagcaggaacgcgcggtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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