KEGG T01958: LC40

Limosilactobacillus fermentum CECT 5716: LC40_1153

Entry

LC40_1153         CDS       T01958

Name

(GenBank) 3-methyladenine DNA glycosylase

K03652

DNA-3-methyladenine glycosylase [EC:3.2.2.21]

Organism

lfr Limosilactobacillus fermentum CECT 5716

Pathway

lfr03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:lfr00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LC40_1153
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lfr03400]
    LC40_1153
Enzymes [BR:lfr01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     LC40_1153
DNA repair and recombination proteins [BR:lfr03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LC40_1153
Prokaryotic type
     LC40_1153

SSDB

Motif

Pfam:

Pur_DNA_glyco

Other DBs

NCBI-ProteinID:

ADJ41715

Position

complement(2063909..2064694)

AA seq 261 aa
MTYRGARGGQPESGSRPGRRVGCKSVRVLMPSYPVLSVRTLIIILIISGGNQMSPYQAFF
TNRPTEEIAKDLLGRELSYQSPAGRVAGLIVETEAYLGEQDSASHAYNGRRTNYSEALYG
APGTIYVYQIRAHYCFDVVVQDQEEPQGILIRALEPTEGLELMEERRHQVGVNLTNGPGK
VGQALGLVDRHLDGQPLETAPLSIDLTKRRAPQSIGVSSRVGVNQRGSHGNAPLRFFVDH
NPYVSKMLKRDSDLVNHGWGD

NT seq 786 nt +upstreamnt +downstreamnt
ttgacataccgcggggccagaggcggtcaaccagaatccggtagccgtccaggtcggcgg
gttgggtgtaaatccgttcgagttttaatgccatcatatcccgtcctttctgttcgtacc
cttatcataatcctaattatcagtggaggaaaccaaatgtcaccataccaagcctttttc
acgaatcgccccaccgaagagattgccaaggacctcttggggcgtgaactcagttaccaa
agccccgcggggagagtggcgggcttgattgttgaaaccgaggcgtacttgggtgagcag
gattcggcttcccacgcctacaacgggcggcggaccaactattccgaggccctgtacggg
gcgccaggaacgatctacgtctaccaaatccgggctcactactgctttgacgtggtcgtg
caagaccaagaagaaccccagggaattttgattcgggcactagagcccacggaggggctt
gaattaatggaggagcgccgtcatcaggtcggggtgaacttaactaacgggcccggcaag
gttgggcaggccctggggttagtggatcgccacttagatggtcagccgctagaaacggcg
ccgctttcgattgatttaaccaagcggcgggcgccccaatcgattggggtcagttcccgg
gtgggggtcaaccaaagggggagccacggtaacgccccgttgcgcttctttgtcgaccac
aacccctacgtttccaagatgctaaagcgcgattccgacctggttaaccacggatggggg
gattga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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