KEGG   Leuconostoc gelidum JB7: C269_06635
Entry
C269_06635        CDS       T02322                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
lge  Leuconostoc gelidum JB7
Pathway
lge03030  DNA replication
lge03410  Base excision repair
lge03420  Nucleotide excision repair
lge03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lge00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C269_06635
   03410 Base excision repair
    C269_06635
   03420 Nucleotide excision repair
    C269_06635
   03430 Mismatch repair
    C269_06635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lge03032]
    C269_06635
   03400 DNA repair and recombination proteins [BR:lge03400]
    C269_06635
Enzymes [BR:lge01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     C269_06635
DNA replication proteins [BR:lge03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C269_06635
DNA repair and recombination proteins [BR:lge03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     C269_06635
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C269_06635
   MMR (mismatch excision repair)
    DNA ligase
     C269_06635
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C269_06635
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 DNA_ligase_ZBD BRCT PTCB-BRCT HHH HHH_8 HHH_3 Ribosomal_S13
Other DBs
NCBI-ProteinID: AFS40764
UniProt: A0A9N7B674
Position
complement(1377434..1379479)
AA seq 681 aa
MLPELRPIEQLSTEAAQQEIAKVQDDLRQYGIAYYEQDAPIVEDYIYDAMYARLVALEAA
FPQFVNPDSPTQNVGGAMTKSGLDKVVHPAPMLSLGDVFSLEELDEWDSRTTKSLGFQSD
YNLELKIDGLAVALTYVSGKLVQASTRGNGTIGEDVTANVKMIKAIPQVLNEPITIEVRG
EIYMPKSSFSTLNKQRELDGLAPFANPRNAAAGSLRQLNAKIMKQRNLSAFVYYTVEPDI
LGSTTQSDALKRFAALGLPTDTHNRVITKMSDINNYITEYTVARDNLAYGIDGVVVKVNR
LDDQLDLGNTVKIPRWAIAYKFPPEEALTVVRAIEWTVGRTGAVTPTAVMDPVQLAGTTV
QRASLHNPDYLNEKGVRLEDTVTLHKAGDIIPEIGQVILSKRSTDSKAYEIPFFCPACQS
ELVHIEGEVALRCINPFCSAQIQEGLTHFASRNAMNIEGMGPRVIAQLLKAGYIKDVAAI
YRLTSEQLFSLDKFKEKAVTNLLMSIARSKDNSLERLLFGLGIRMVGAKAARVLAGKFKN
LQSIATATTEDIANIDGIGDRIARSIVQYFEMPESKQLLQELTDAGVNQKYLSDVEIDEN
SFFYHKKIVLTGKLEKNSRSIVTKWLQDHGASVSGAVSAKTDLLIAGEAAGSKLRKANEL
GVPTWTEEEFISAQVKEEIDK
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgttaccagaattaagaccaattgaacagttatcgacagaagcagcacaacaagaaata
gccaaagtacaagatgatttgaggcaatatggtatagcatactacgagcaagatgcacca
atagtggaagattatatatatgatgcgatgtatgcgcgccttgttgctttggaagctgca
tttccgcagttcgtaaaccctgattcaccgacccaaaatgttggcggtgcaatgactaag
tctgggttggataaagttgtacatccagcaccaatgctgtcgttaggtgatgtttttagt
ttagaagagcttgacgagtgggattcacggaccactaaatcgttaggtttccaatcagat
tataaccttgaactgaaaattgatggtttggcagtcgcattaacgtatgtttctggcaag
cttgtgcaggcgtctactcgtggaaatggtacaattggggaggatgtaacagcaaatgtg
aaaatgattaaggcaatcccgcaggtattgaatgaaccaattactattgaagttcgcggt
gaaatttatatgccaaaatctagcttttcgactttaaataagcaaagagaattagatgga
ttagcaccttttgctaatccgcgtaacgctgctgctggatcattgcgacaattaaatgca
aaaattatgaagcaacgtaatttatctgcatttgtgtactatacagtcgaaccagatatc
ttaggaagtacaacacaaagtgatgctttgaagcgatttgcggcgttggggctgcctaca
gatacacataaccgcgtgattaccaaaatgtcagatattaataattatataactgaatac
actgttgcacgtgataatttagcctatggtattgacggcgttgttgtcaaagttaatcgg
ctagatgatcaacttgatttaggcaatacggttaaaattccgcgttgggcaattgcctac
aaatttccgccagaagaagcgctgacagttgtgcgtgctattgaatggacggttggccga
actggggcagttacaccaacagcagtcatggatcctgttcagcttgctggcactacggta
caacgggctagtttacataacccagactatcttaatgaaaaaggtgttagactagaagat
acagtaacattgcataaagctggggatattattccagaaattggccaagttatcttgtct
aaaaggtcaactgatagtaaggcatacgagataccgttcttttgccctgcctgccaatca
gaactggtacatattgaaggtgaagttgctcttagatgtattaatccgttttgttcagcg
cagatacaagaaggattgacacattttgcttcacgcaatgcaatgaatattgaggggatg
gggccaagagttattgcacagctactgaaggcaggttatattaaagatgtagctgctatt
tatcgtttgacgtcagaacagttattttcattggataaattcaaagaaaaagcggtgact
aatttattgatgtcaattgcacgttcaaaagacaattcacttgaacgattgttatttgga
ttaggcatacggatggttggtgctaaagcagcgcgtgttcttgctggaaaatttaagaat
ttacagtcaattgcaacagcaacaactgaagatattgctaatattgatggcattggagac
agaattgcacgatcgattgtacaatattttgagatgccagaatcaaagcaattgttgcaa
gaattaacagacgctggtgttaatcaaaaatatttgtctgatgttgaaattgatgaaaat
tcttttttctatcacaaaaaaattgttttaacgggtaagcttgaaaaaaacagccgttct
atagtcacaaaatggctacaagatcatggggcaagtgtttcaggggctgtatcagcaaag
actgatttacttatagcaggtgaagctgctggtagtaaactgcgaaaagcaaatgaacta
ggtgtgccgacatggacagaagaagaattcattagtgcgcaagtaaaagaggaaattgat
aaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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