KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_111015
Entry
LOTGIDRAFT_111015 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
lgi  Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_111015
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    LOTGIDRAFT_111015
   microRNA pathway
    RISC loading complex
     LOTGIDRAFT_111015
SSDB
Motif
Pfam: Dicer_platform Dicer_dsRBD Ribonuclease_3 Dicer_PBD Ribonucleas_3_3 Dicer_dimer PAZ Helicase_C dsrm DEAD ResIII Importin_rep_6 KIND Anticodon_2
Other DBs
NCBI-GeneID: 20230665
NCBI-ProteinID: XP_009046342
JGI: 111015
UniProt: V4BAB4
Position
Unknown
AA seq 1800 aa
MKVDLVDSALQKNTIVCLSSSSEKLFIALMVIKELSTVLRKPLSEGGKRTIYVVNSDDTA
EFQCQILSRHTNLKIGYYTIDKDTENWAKDKWQEEFTSKHVLVFTAEVILDVLTQNSLPL
PQINMLIFDDCHLAVGDHSYVQIMHMIENEKVEPHVIGLTASILGSRIPEPHKLKHTITS
LENIFHCTAETSMLVISERFDSRPTESVLQCFTDQSDEVVLKLNDIIDSALFFLYECNIS
PDTEEEPFKKDPRQLGINVLSEIRNILHQLGTWCTSRIAEILIPQIEKNEKSESCAINKR
FIRFTLTQLRLIVKVFEANFNPDYDVEELLMYSTPKVRELVHMLRKYKPDWDFMIISSDD
LSDDELSNLSDDNEDADSLNLSDSDYDEKDDHSPKLIHVAVKRSTTDADGQIISNGDNTD
AKQLCGLVFVDQQYVALALNKFLEEVCSWDENMCFLKSQHIVGQGYRSAPNKVSIGKVYR
KQEEVLRKFRMQELNLLIATKVLEHGVDIPKCNLVVRFDPPRDYKSYTLSKGRARARDSD
YVILLNEENEKLFSEDLKLFKEIEEILIGKEKEKDIVEEDSSDYLDIVPKYYPTNHNIDV
HVSLNNSIALINRYCAKLPSDAFTHLTPQCTISTIQHGDNISYIGHIRLPINSPIKLQIE
GIAMPTKKLAQKAAAQKACEMLHKTGELDEQLQPVGKEMFLQEQQEEWDDEDVTSQGRPG
TTKRKQYYFKKVAEAFDKSHPDVNKKCYLYIINMVLTGRITEEQNTRGRSIYAPEETTRC
LGILSSKQIPQVPMFPVYTRSGEVTVSVDLVQSDITLDNQQLKQLQDFHLFLFTQVLHLD
KDPMECNGSLADVGYLIVPVDPSLDALADIEWSFVEYVTSNNSDQKKNVFDSKRDIFMFD
KEAFLDAVVMPSYRNIDQPQNFYVAEIRYDLSPLSSFPSPELYKTFNDYYSTKYGLVITN
TDQPLLDVDHTSARLNLLTPRYMNQKGVALPTSSAETKRARRENLQQKQILIPELCDIHV
FPASLWRKAACLPAILYRMNYLLLAEEIRLRIARETGIGVIDLPEGFRFPQLDFGFETSP
DKIKLNEKSDSSSDSDSGIASSDSCLVRSESDIVSSASDASIKLEDKLVDGTHTNHVEIF
NDTMDVISNKLIATNINSESNTDKPEASIPSDSSDKTVIDISDSSPDKDSCKQCQKNILQ
YQNCCESNVNDLKNLQDCVQNADSDTFDVGVWNSPDVKIIEGVADDKNFSLPEISLDEDR
DLDTFVGPSPCLILQALTMSNANDFFSLERLETIGDSFLKYAITVYLYCSYPGIHEGKLS
YLRSKQVSNYNLYRLGQKRGVAECMVSSKFEPYENWLPPCYIVNEDRRRGPVPKVLIAGT
KNDKASITSNFVLEESKPSKNHFPIGTFNTGEGKVNDFNQELKEAEELDELEKASEANQL
LIPYSLQTQHGIPDKSVADCSEALIGCYLTTCGKKAALMFMSWLGLKVLPKKERVGDSIK
KEGQEVRTLDHEYEELSCPVSPLITDENSSRKKLEMLLNGYDEFEESIEYKFQDRSYLLQ
AFTHASYHYNTVTDCYQRLEFLGDAILDYVITRHLYEDSQKYSPGILTDLRSALVNNNIF
AALAVKWNFHQYFKAISPALFQVIEKFVTRQKDREDEIDIDDEFNDKDEEDDDDDEEVVE
MEIPKALGDIFESVAGAIYLDSGMSLDAVWTVYYRLMKPQIEKYLKCIPKSPVRELLEME
PETAKFEKPERTMDGKIRVTVNVVGKGVFSGIGRNYRIAKSAAAKKALRCMKTMQQQGLI
NT seq 5403 nt   +upstreamnt  +downstreamnt
atgaaggttgacttggtggactcagctctgcagaaaaataccatagtttgtttgagcagt
tcttctgaaaagctatttatagctcttatggtaattaaagaattgagcacagtgctacgt
aaaccattatcagaggggggcaaacgcaccatatatgttgtcaattcagatgatacagca
gaatttcaatgtcagatactgtccagacatactaatctaaagattggttattatacaata
gataaagatacagagaactgggcaaaagataaatggcaagaagaatttacttctaaacat
gttctagtctttactgcagaggtcatactggatgttttaactcaaaattcccttccatta
cctcaaatcaatatgctcatatttgacgattgtcatttagctgtgggtgatcattcatat
gttcaaatcatgcatatgattgaaaatgagaaggtggaacctcatgtcataggacttaca
gcatccattttaggtagccgaattccagaacctcataagctcaaacataccataacatct
ctagaaaatatctttcattgtacagctgagacatccatgttagtcatctcagaacggttt
gactctagacctacagaatcagttttacaatgttttactgatcagtcagatgaagtagtg
ctcaaacttaatgacataatagattcagctttattttttctttatgaatgtaacatatca
cctgatacagaggaggaaccttttaagaaagaccctcgacaacttggcatcaatgttctc
tcagaaatcagaaatattttacatcagttgggaacatggtgtacatcccgtattgctgaa
attctcatcccacaaattgaaaaaaatgaaaaaagtgaatcttgtgctattaataaaaga
tttattcgatttactcttacccagttacgtttaattgtcaaagtttttgaagcgaatttt
aatcctgattatgatgtagaagaattgttgatgtattccacacccaaagtacgggaattg
gttcacatgctgagaaaatataaaccagattgggattttatgataatcagtagtgacgat
ttatctgatgatgaattatctaatttgtctgatgataatgaggatgcagattcactcaat
ttatcagattcagattatgatgaaaaagatgatcattcacctaaattaatccatgtagct
gtgaaacgatcaactacggatgcagacggtcaaattattagtaatggtgacaacactgat
gctaaacaactctgtggtttagtttttgttgatcaacaatacgtggctctagctttaaat
aagtttttagaggaagtatgtagttgggatgaaaacatgtgttttttaaaaagtcagcat
attgtagggcaagggtatagaagtgctccgaataaagtgtctataggtaaagtttatagg
aaacaagaagaagtattaagaaagtttcgaatgcaggaattaaatttattgatagctacc
aaagttttagaacatggtgtagatataccaaaatgtaacttagttgttcgtttcgatcct
ccacgagattataaatcttatacattatctaagggtagagctagagctcgagattctgat
tatgttatattattaaatgaggaaaatgaaaaattattcagtgaagatttaaaactattt
aaagagatagaagagatattaattggtaaagagaaagaaaaagatatagtagaagaagac
agtagtgactatttagatatagtacccaaatattaccccactaatcataatatcgatgtt
catgtttctttgaataattccatagcattaattaatagatactgtgccaagttacctagt
gatgcctttacacatcttacacctcaatgtactatatcaactatacaacatggtgataat
atatcatatattggtcatatcagattacctattaactctcctattaaacttcaaattgag
ggtattgcaatgccaaccaagaaacttgctcaaaaagctgctgctcagaaggcttgtgaa
atgttgcataaaacaggtgaactagatgaacagttacaaccagttggtaaagaaatgttt
ctacaagaacaacaagaagaatgggatgatgaagatgtaacaagtcaaggtcgacctgga
acaactaaacgtaaacaatattatttcaaaaaggtggctgaagcttttgataaaagtcat
ccagacgtgaataagaaatgttatctatatattatcaatatggtattaactggtcgtata
actgaagaacagaatactagagggcgaagtatttatgctccagaagaaaccaccagatgt
ttaggtattttatcatctaaacagattccacaggttcccatgtttcctgtctataccaga
tcaggagaagtgactgtatctgtagatttagttcaatcagatataacattagataatcag
caacttaaacaactacaagacttccatttatttttatttactcaagtcctacatctagat
aaagatcctatggaatgtaatggtagtttagctgatgtcggttatttaattgttcctgtt
gatccttctttggatgctctggctgatatagaatggagttttgtagaatatgtaactagt
aataattcagatcaaaagaagaatgtttttgattcaaaacgtgatatatttatgtttgat
aaagaggcttttctcgatgctgttgtgatgccatcatatcgtaatatagatcaacctcag
aacttttatgtagctgaaatccgctatgaccttagtcctcttagttccttcccatcaccc
gaactttataaaacttttaatgactattacagtaccaaatatggtcttgtgatcaccaac
actgaccagccattattagatgtagatcatacgtctgctcggcttaatctacttacacca
agatatatgaatcaaaaaggcgtagcccttcctaccagtagtgctgaaaccaaaagagcc
agacgtgaaaatttacaacaaaaacaaatcttgattccagaattatgtgatattcatgtt
tttccagcctctctgtggagaaaagctgcatgtctgcctgctatattatacagaatgaat
tatttattattagcagaagaaataagattaaggattgctcgtgaaacgggaattggtgtt
attgaccttccagaaggttttaggtttcctcaattagattttggatttgagactagtcca
gataaaattaaactcaatgaaaaaagtgattcgtcttctgatagtgactcaggaattgca
tcaagtgactcatgtttagttcgaagtgaatctgatattgtgtctagtgcgtctgatgct
agcataaaattagaagataaactagtagatggtacacacactaatcatgttgaaattttc
aatgatactatggatgtaataagtaataaacttatagcaactaatattaactctgaatca
aatactgacaagccagaagccagcattcctagtgattctagtgataaaacagtgattgat
ataagtgactctagtcctgataaagatagctgtaagcaatgtcaaaagaatatattacaa
tatcaaaactgttgtgaatcaaatgtcaatgatttaaaaaatcttcaagattgtgttcaa
aatgctgattctgatacatttgatgttggtgtttggaactcaccagacgtcaaaataata
gagggtgtagcagacgacaaaaacttttcattacctgaaatctccctagatgaagataga
gatctcgatacctttgtgggaccaagtccatgtcttattttacaagccttaaccatgtcc
aatgcaaatgatttttttagtttagaaagacttgaaaccattggtgattcattcctgaaa
tatgctataactgtttatttatattgttcttatcctggaatacacgagggtaaattaagt
tatttacgtagtaaacaagtcagtaattataatctatatcgactgggtcagaaacgtggt
gtagctgaatgtatggtatcatctaagtttgaaccatatgaaaactggctacctccatgt
tatatagtcaatgaagaccgtagacgtggacctgttcctaaagttttgatagctggtact
aaaaatgataaagcatccattacctcaaactttgttctagaagaatcaaaacccagtaaa
aaccattttcctattggaactttcaacactggtgaaggtaaagtgaatgattttaatcaa
gaattaaaagaagcagaagagttagatgaactagagaaagcaagtgaagctaatcaacta
ttaataccatatagccttcaaacacaacatggtataccagataaaagtgtggctgattgt
tcagaagctctgattggctgttatttaactacttgtggcaaaaaagctgctttaatgttt
atgtcatggttaggattgaaagttttaccaaagaaagaaagagttggggattctattaaa
aaagaggggcaagaggtaagaactttagaccatgaatatgaagaattaagctgtcctgta
tcaccattaattactgatgagaatagcagtagaaagaaattagagatgttgttaaatggt
tatgatgaatttgaagaaagtatagaatataaatttcaagatagatcctatttattacaa
gcttttactcatgcctcttatcattataatactgttactgattgttatcaaagattagaa
tttcttggtgatgctatattagattatgttataaccagacatttatatgaagattctcag
aaatattctcctggtattttaacagatttaagatcagctttagttaataacaatatattc
gctgcattagctgttaaatggaactttcatcaatattttaaagccatctccccagcatta
tttcaagtgatagagaaatttgtcacacgtcagaaagacagagaagatgaaatagatatt
gatgacgagttcaatgataaagatgaagaagatgatgatgatgatgaagaagttgtagaa
atggagatacctaaagctttaggagatatatttgaatctgtagctggtgctatatattta
gacagtggaatgtcattagacgctgtatggactgtatactatagattaatgaaaccacaa
atagagaaatatttgaaatgtatacccaaatctccagtacgagaattattagagatggaa
cctgaaacagctaagtttgaaaaaccggaacgaacaatggatggtaaaattcgagtaaca
gttaatgttgtaggtaaaggtgttttcagtggaattggcagaaattacagaatcgccaaa
agtgctgctgctaaaaaagcattaagatgtatgaaaactatgcaacaacaagggcttata
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (67)   
   KEGG ORTHOLOGY (1)   
   RefGene (62)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (87)   

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