KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_127402
Entry
LOTGIDRAFT_127402 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03060  Protein export
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    LOTGIDRAFT_127402
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lgi02044]
    LOTGIDRAFT_127402
Enzymes [BR:lgi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     LOTGIDRAFT_127402
Secretion system [BR:lgi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   LOTGIDRAFT_127402
  Eukaryotic Sec-SRP protein
   LOTGIDRAFT_127402
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW nSTAND3 ResIII AAA AAA_33 AAA_17 DUF2209 SRPRB APS_kinase AAA_22 MeaB MMR_HSR1 MobB AAA_19 AAA_16 AAA_30 ATP_bind_1 AAA_31 6PF2K Thymidylate_kin AAA_18 Zeta_toxin PduV-EutP
Other DBs
NCBI-GeneID: 20232706
NCBI-ProteinID: XP_009061606
JGI: 127402
UniProt: V4A326
Position
Unknown
AA seq 500 aa
MVLADLGRKITSALKSLSNATIINEEVLNDMLKEICRALMEADVNIRLVKSLRENVRSVI
DFDEMAGGLNKRRMIQSAVYKELVKLIDPGVKAFHPSKGKSNVIMFVGLQGSGKTTTCTK
LAYYYQKKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYSESDPVIIAQEGVDKFK
EENFEIIIVDTSGRHKQEDSLFEEMLQVHQAVTPDNVVFVMDASIGQACEAQARAFKDKV
DVASVIITKLDSHAKGGGALSAVAATKSPVIFIGTGEHIDDFEPFKVQPFVSKLLGMGDI
EGLIDKVNELKLDDNEELMKKLKQGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFSSDFM
TKGTEQESMARLKKLMTMMDSMNDSELDSVEGEKLFSRQPTRVQRVARGSGVSIKDVNDL
LSQYKKFAQMVKKMGGIKGLFKGGDISKNVNPAQMAKLNQQMAKVMDPRVLQHMGGMQGL
QSMMKQFQQGAGGKMGNMFN
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggttttagcagatttgggtcgtaaaattacttcagctttgaagtcgctgagtaatgct
accattatcaatgaagaggttctaaatgatatgttaaaggaaatatgtcgagctctgatg
gaagctgacgtcaatattcgacttgtgaaatcactcagagaaaatgtcagatcagtgata
gattttgatgagatggctggaggtttaaacaaacgtagaatgatccaatcagctgtgtat
aaagaattagttaaattgattgatccaggagtaaaagcatttcatccatcaaaaggaaag
tccaatgttattatgtttgtcggtctacagggaagtggaaagactaccacttgtactaag
ttagcatattactatcagaagaagggttggaaaacatgtttaatttgtgctgatactttc
cgtgctggagcttttgatcagttgaaacagaatgctaccaaagccagaattcctttttat
ggcagttattctgagagtgacccagttattattgcccaagaaggtgttgataaatttaaa
gaagagaattttgagattatcattgtggatactagtggtcgacataaacaagaagattct
ttatttgaggaaatgttacaagttcatcaggctgttactcctgataatgtagtctttgtt
atggatgcttctattggtcaagcttgtgaagctcaagccagagcttttaaagataaagta
gatgttgcttcagttattataactaaattagacagtcatgctaaaggtggtggtgctctt
agtgctgttgcagcaactaaaagtccagttatatttattggtactggagaacatattgat
gattttgaaccatttaaagttcaaccatttgtcagtaaattattaggtatgggtgatata
gagggattgatagataaagtgaatgaattaaaattagatgataatgaagaattgatgaaa
aaattaaagcaaggtcaatttacattacgagatatgtacgaacagtttcaaaatattatg
aagatgggaccatttagtcaaattatgggtatgatacctgggtttagctctgattttatg
acgaagggtacagaacaagaatccatggctcgattaaaaaaactcatgacaatgatggac
agtatgaatgattcagaattggacagtgtggaaggtgagaaattattttcacgtcaacca
actcgagtgcaacgtgtagccagaggttcaggagtgtccataaaagatgtcaatgatctg
ttaagtcagtataagaaatttgctcagatggttaaaaagatgggaggcatcaagggatta
tttaaaggaggtgatatcagtaagaatgttaacccagctcaaatggctaaactcaatcaa
cagatggctaaagttatggatcccagagttctacaacatatgggtggtatgcaaggccta
caaagtatgatgaaacagtttcaacaaggtgctggcggcaagatgggaaatatgtttaat
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (80)   
   KEGG ORTHOLOGY (1)   
   RefGene (75)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (27)   
   Pfam (27)   
All databases (116)   

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