KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_175432
Entry
LOTGIDRAFT_175432 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K08588  ubiquitin carboxyl-terminal hydrolase BAP1 [EC:3.4.19.12]
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    LOTGIDRAFT_175432
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lgi01002]
    LOTGIDRAFT_175432
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lgi04121]
    LOTGIDRAFT_175432
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_175432
Enzymes [BR:lgi01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     LOTGIDRAFT_175432
Peptidases and inhibitors [BR:lgi01002]
 Cysteine peptidases
  Family C12: ubiquitin C-terminal hydrolase family
   LOTGIDRAFT_175432
Ubiquitin system [BR:lgi04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UCH
    LOTGIDRAFT_175432
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     LOTGIDRAFT_175432
SSDB
Motif
Pfam: Peptidase_C12 UCH_C
Other DBs
NCBI-GeneID: 20243182
NCBI-ProteinID: XP_009054896
JGI: 175432
UniProt: V3ZSJ6
Position
Unknown
AA seq 554 aa
MNINKGWLELESDPGLFTLLLEDFGVNGVQVEEIYDLQKSIEGPVYGFIFLFRWIEERRS
RRKTSTEVDSFVKEEEIVNSIFFAQQIIPNSCATHALLSVLLNSNKVSLGENLNALKEFS
HKMNPEDKGLAIGNIPALARAHNSHARPEPKHLPEKQAGLSTVKTGEAFHFVSYVPINGR
LFELDGLKPYPIDHGPWEKDEAWTEKFRRVITDRLGMATGGEPNNDIRFNLMAVVPEKRL
VYENKLKTLKTNRRIVFETLEQMVKVSQTQKDESNYKDVSSTESSPVKIKTEPSTSTSVT
TVEGEVPPGESSPTDSEITSEAVKTYDPTSQSPVKEKVKIQISVSDEKDGNITNTIPRTV
SLTDVTKPLTIETKFSCLSGPGSESTDTASEAGSGFSSPGSFHIPSCQCSPQADVISTGG
ETVTTDLSQTEEKMDTTESKSPVKLKHKSSHSGFTPKDLVSLLKNVEREISVCENNLKEE
NEKRRKYKIDDCRRTHNYDEFITLFLSMLAEQGLLHSLVEDHVNNKKRTNVGRLQSKSLS
TDKRKKTKTRRKRS
NT seq 1665 nt   +upstreamnt  +downstreamnt
atgaacatcaataaaggatggctggagttagaaagtgatccgggtctattcactctgctt
ctagaagatttcggggtgaatggagtgcaagtagaagaaatttacgacctacaaaagagc
atcgagggcccagtttatggtttcatcttcttgttcagatggatcgaagaacgccgatca
agacgaaaaaccagcacagaagtcgattcatttgtgaaagaagaagaaattgtcaacagt
attttctttgctcaacaaattattcctaattcttgtgccactcacgccttactgagtgtt
ttattgaacagtaataaggtgtcactgggagaaaacctaaatgctttgaaagaattctct
cataagatgaacccagaagataaaggcctagctatcggaaatattccagctttagcccga
gctcacaacagtcatgctagaccagaaccaaaacatcttcctgagaaacaggcaggtcta
tcaactgtcaaaactggagaggcttttcattttgtaagttacgtacctataaatggacgg
ttatttgaactggatggtttgaagccgtatcctattgatcatggaccatgggagaaggat
gaagcatggacggagaagttccgaagagtgataacagaccgactgggaatggctacagga
ggggaaccaaataacgacattcgtttcaatcttatggctgtggttccagaaaaacgcctc
gtttatgaaaacaaattgaaaactttgaagaccaacagacgaattgtatttgaaacttta
gaacaaatggtaaaagtgagccagactcagaaagatgaatcgaattataaagacgtgtct
agtacggaatcatctccagttaaaattaaaacagaacctagtacaagtacaagtgttaca
actgttgaaggtgaagtaccaccaggtgaatcaagtcctactgattctgaaatcacatcg
gaagccgttaaaacatacgacccaacttctcaatctcctgttaaagaaaaagtgaaaatt
caaatttctgtttctgatgaaaaagatgggaatattactaacactataccacgaacagtt
tcattaacagatgttacgaaaccactcaccattgaaaccaaattttcctgtctatctgga
ccaggatcagaaagtacagacactgcctctgaagcaggaagtggattcagttctccagga
agtttccatattccttcgtgtcagtgtagtccgcaagctgatgtcatttctactggcggt
gaaactgtaaccactgatttatctcaaacagaagaaaagatggacacaacagaatcaaaa
tctcctgtaaaactcaaacataaatcaagtcatagtggtttcacgcctaaagatttagtt
tctttgttaaaaaatgtagaaagagaaattagtgtgtgtgaaaataatctgaaagaagaa
aatgaaaaacgtcgaaaatataaaattgatgattgtcgaagaactcataattatgatgaa
tttataacactgtttttatctatgttagctgaacaaggattattacatagtttagttgaa
gatcacgttaataataaaaaacgaacaaacgtcggccgtcttcaatcaaaatcactgagt
acagataaacgaaagaaaacaaaaactcgtaggaaacgatcttga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (71)   

Download RDF
DBGET integrated database retrieval system