KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_182011
Entry
LOTGIDRAFT_182011 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03020  RNA polymerase
lgi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LOTGIDRAFT_182011
  09124 Replication and repair
   03420 Nucleotide excision repair
    LOTGIDRAFT_182011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lgi03021]
    LOTGIDRAFT_182011
   03400 DNA repair and recombination proteins [BR:lgi03400]
    LOTGIDRAFT_182011
Transcription machinery [BR:lgi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     LOTGIDRAFT_182011
DNA repair and recombination proteins [BR:lgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LOTGIDRAFT_182011
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 20244466
NCBI-ProteinID: XP_009051789
JGI: 182011
UniProt: V4C8A9
Position
Unknown
AA seq 117 aa
MNAPPTFEAFLLFEGEKKITIEKDTKVPNAALFTVNKEDHTLGNMITTQLLKDPQVLFAG
YKNPHPLEHKFVVRIQTTSDYSPQEAFTNAITDLISEISLLEERFKESVKERAEGEI
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaatgcccctccaacattcgaagcatttttactttttgaaggagaaaagaaaattact
atagaaaaggacactaaagtcccaaatgctgcactgttcacagtgaataaagaagatcat
acacttggaaacatgatcaccacacaattgttgaaagatccccaagttttgtttgctggt
tataaaaatccccatccattagaacataaatttgtggtgagaatacaaactacctcagat
tacagtccgcaagaagctttcaccaatgctattacagatcttatcagtgagatatcacta
ctggaggaaagattcaaggaatctgtaaaagaaagagctgaaggagaaatataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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