KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_221850
Entry
LOTGIDRAFT_221850 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K16911  ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]
Organism
lgi  Lottia gigantea (owl limpet)
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lgi03009]
    LOTGIDRAFT_221850
   03036 Chromosome and associated proteins [BR:lgi03036]
    LOTGIDRAFT_221850
Ribosome biogenesis [BR:lgi03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    LOTGIDRAFT_221850
Chromosome and associated proteins [BR:lgi03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    LOTGIDRAFT_221850
SSDB
Motif
Pfam: DEAD Helicase_C GUCT ResIII CMS1 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 20247021
NCBI-ProteinID: XP_009064553
JGI: 221850
UniProt: V3ZKE7
Position
Unknown
AA seq 719 aa
MKLQESSVDPATKKMKIEKKKKIKNEVEEVEEEETPVKIKKKKEKKSKDTEEPGKKLKKE
KKVKIEEAETPSNVERKDKKEKKSKVNGAKAETNGLKSETNGEIISNGKQEEELSPQQKA
GAFSNFRISPNTVKKLQKNGITYLFPVQSETFDIVYSGSDIITQARTGTGKTLAFSLPII
EKLQLDKSPPQRGRPPKVLVMAPTRELAKQVCEDFESYSSSLVVLCIYGGTPYGPQERVL
RSGVDVIVGTPGRINDHIEKGNINLSQIKHVILDEVDNMLDMGFVEIVEQILAYAYKVHA
IISERDEKPQTMLFTATLPPWVRKTANKYMREDVKTIDLIGKDFNKTSKTHLAIKCNHSE
RASILGDIVSVYSGNHGRAMIFCQTKKEADELAISPCIKVEGHVLHGDIAQEKRESVLKG
FREGKYKVLITTDVAARGLDIPEVDIVIQCEPSKYADAYIHRSGRTGRAGRSGVCVCLYS
AREEHSLRALEYKAGIKFKRTGPPTPEDIIKAASDDAYRALDDVPKETIQHFMEKAESLI
EEKGACEALAAALAVISNNTSIERRSLLTAKKGYTTYICRTTVELFGPGYIWRFLEDNFP
EVKDKAQSMTLLKDKMGCAFDIPTEFESTIGDEYEGRNGIVISKASEMPALIQTQNRPIG
RSSWGGGGGGGSYRGRNGFNNYSNNRHNFRGSSGSSSGFGYKRKPMFSDHGGSKRTKFG
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgaagttacaagaatcatccgtggatccagcgacaaagaaaatgaagattgaaaagaag
aaaaagatcaagaatgaagttgaagaagttgaagaagaagaaactccagtcaaaataaaa
aagaaaaaagaaaagaaatctaaagacactgaggagccagggaagaaattgaaaaaagag
aaaaaagtaaagatagaagaagctgaaacaccaagtaatgttgagagaaaagataaaaag
gagaaaaaatctaaagtaaatggagctaaagctgaaacaaatggtttaaaatcagaaaca
aatggagagatcatttccaatgggaaacaagaggaagaattgtcaccacaacaaaaggct
ggggcattttcaaacttcagaattagcccaaacactgtcaaaaaactacaaaaaaatggg
attacatatttatttccagttcaatcagaaacctttgatattgtttatagtggatctgat
attatcacacaagccagaactggaacaggaaaaactttggccttttcactgcctataatt
gagaaattacagttagataaatcaccaccacaaagaggacggcctccaaaggtactggtc
atggcaccaacaagagaattagctaaacaagtctgtgaagattttgaatcctactcatca
tcactagttgtactgtgtatttatggtggaacaccctatggtcctcaagagcgagtatta
agatctggtgtagatgttatagttggtacaccaggacgtatcaatgatcatatagagaaa
ggcaatattaatctttcacagattaaacatgttatactagatgaggttgacaatatgtta
gatatgggttttgtggagattgtggaacagattctagcttatgcttacaaagttcatgct
ataatttcagagagagatgagaaacctcaaactatgttatttactgctactctaccacca
tgggtcagaaaaacagctaataaatatatgagagaagatgtcaaaactatagatttaatt
ggcaaagattttaataaaacttctaaaacacatttagctatcaaatgtaatcacagtgag
agggcatctatattaggtgatattgtatctgtatatagtggtaatcatggacgagcaatg
attttctgtcaaactaaaaaggaagccgatgaacttgctataagtccttgtataaaagta
gaaggtcatgtgttacacggtgatattgcccaagagaaaagagaatctgtgttaaaggga
tttagagaaggtaaatataaagtgttaataacaactgatgttgctgctagaggattagat
atacctgaagtggatatagttatacaatgtgaaccttcaaagtatgctgatgcttacatt
catagatctggtagaacaggtcgagcaggtagatcaggtgtatgtgtatgtttatatagt
gccagagaagaacattcattacgagccctagaatataaagctggtataaaattcaaaaga
acaggaccacctacaccagaagacattataaaagcagcatctgatgatgcatacagagca
ttagatgatgtacctaaagaaacaattcaacattttatggaaaaagcagaaagcttgatt
gaagaaaagggtgcttgtgaagcattagctgcagccctagcagtcatttctaataataca
tctatagaaagaagatcactattaacagcaaagaagggctatacaacttatatttgtcga
accacagtggaattatttgggccaggctatatctggagatttttagaagataattttcca
gaagtgaaagataaagctcaatcaatgacattgttaaaagataaaatgggctgtgcattt
gatatcccaacagaatttgaatcaacaataggtgatgaatatgagggacgtaatggtata
gtaatatctaaagctagtgaaatgccagctttaatacaaacacaaaatagaccaattgga
cgatctagttggggtggaggaggaggaggagggagttatcgtggtaggaatggttttaac
aactattctaataatagacataatttccgtggaagtagtggtagcagcagtggatttgga
tacaaaagaaaaccaatgttttctgatcatggcggttccaaaaggactaaatttggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (50)   

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