KEGG   Lottia gigantea (owl limpet): LOTGIDRAFT_234706
Entry
LOTGIDRAFT_234706 CDS       T03273                                 
Name
(RefSeq) hypothetical protein
  KO
K14312  nuclear pore complex protein Nup155
Organism
lgi  Lottia gigantea (owl limpet)
Pathway
lgi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lgi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LOTGIDRAFT_234706
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgi03019]
    LOTGIDRAFT_234706
Messenger RNA biogenesis [BR:lgi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     LOTGIDRAFT_234706
SSDB
Motif
Pfam: Nucleoporin_N Nucleoporin_C
Other DBs
NCBI-GeneID: 20249619
NCBI-ProteinID: XP_009061172
JGI: 234706
UniProt: V3ZZP8
Position
Unknown
AA seq 1387 aa
MVGGSIPPLGQQDMLDNAGRLIDKHIQEDQNYVDLSELLRVQTHNQPTVSGLHDFEYPSL
TDVGMSVDALRELAPVKTVPLPPELVEQFGRMQCSSMMGLLPEIERAWLAIDSNIFVWKY
EDGTDLAYFDGLNENILSVALVKPKKDIFQPHIRYLLCIATPVDIVLLGVSFSKPFNSVN
NGDVLGEMHLLPDPLFSIPTDNTFITYITGTDDGRIFMAGKDGCLYELAYQAQDGWFSRK
CRKINHSTSNLSFLVPSFLNFSFSEDDPLVQISIDNSRNILFARTEKGNLQVFDLGEDGK
GMGRVASLSHQNITQSAFLIARTIDKSNYKTIVSISALTKSESSNIHLVAVTMSGVRLYF
TTNPFGGGKSRPTMLTLVHVRLPPGFSANSTISRPANIAKSSYSKGVLMMVAGQNEINDI
LWCVSNDTFPIQSQLMESYTALTIDGPTWAMSEVPIKSINTRISTSSMFDKSDPPIVVNQ
HIESCRKFVLLTSQGSRIFNKLRPVEQLQQLLIESQGPDSEEVKGFFRLHRVEQACATCL
ILACSRTAADPKVSDWARMAFFTYGGEPQYHYPPTHGLQPSNIGATYSSSVLATPSSSVV
YSPYSPYNTNASLSQTLQTPHPGMHPAHMSTPAPGFNQSYFQPSMMGNISTGGGPLQDIL
YSGKHNGICIYLGRILRPFWDVAATIEFPCQTEQGLVYYLSSSFNTDEINQTLELVRDLS
DFVEFNAQVDFGGAAESMTSGFPGRIMGVRYSDGMMDDQTRKKLANEAQKLEKISLQNVR
MLLHQVEEVLGLWKVLVDHQFHVLAAALTKDQQNQLRSMTFKNLVINGRELCAALITCLI
TRFLQDNAKIDNISSILRNVCPNLYSTDDATCSMANELLHASKANQNQGEKQRQLYEALR
LFKDVNQPLQLTTVCNQLASVNFYQGIVDLCLTEANKLDPQNLALHFYRCCEPPEDQQGM
QAFINRMECYKCITETLGYLWSASTSHPQAPSVPKSPGPPEAPDLTRISPVQAEQYRNEV
FLLALKSDDELFHVALYDWLFMANHSEKLLESQFMESYLKRKSGIQGDNVAALDMLWKYY
EKIHNFPAAAKILSRLADRPGMDVPLQQRIEYLSRAIMCAKSSTSRMSSAAEGEFLHELE
EKMEVARLQLQVHRALNKIPHKSPVMKEALNRLDSALIDITRLYEDYADNFDLSECKLAI
VHCAGLYDAALIENLWQNIIDKEFDSFSNLDNTSRVTNISNRLVVIAQLYSDTERYFPLG
FILKYLERRSSELNMDPHWIYKVMLQINISPEKLLELYDRMFKSRDPFWQTIHRPLHLLR
VLHGFMTNFTTNPTTLPNMERRRFITMCLDCVSSYLVELQAKSSTDPSVRNLEQQFKQLQ
FKLERLA
NT seq 4164 nt   +upstreamnt  +downstreamnt
atggttggaggaagtataccaccattaggtcaacaagacatgttggataatgctggtaga
ttgattgataaacatattcaagaagatcagaattatgttgatttgtcagagcttctaaga
gttcaaactcacaaccaaccaactgtgagtggactgcatgattttgaatatccaagtttg
acggatgttggaatgagtgttgatgctttaagagaattagctccagttaaaactgttccc
ctacctccagaattagtagagcagtttggacgcatgcagtgtagttccatgatgggactg
ttaccagagattgaaagagcatggctagccatcgactctaatatatttgtgtggaaatat
gaagatggaactgacctagcctattttgatggtttaaatgagaatattttaagcgttgct
ctagtgaaacctaaaaaagatatatttcagccacatataagatatttactatgtatagca
acaccagtagatattgtattattgggggtcagtttctctaaaccatttaacagtgtaaac
aatggagatgtattgggtgaaatgcatttattaccagaccctctattctctatacctact
gataatacatttataacttatattactggtactgatgatgggcgaatattcatggcagga
aaagatggatgtttatatgaacttgcttatcaggctcaagatggttggtttagtagaaaa
tgtcgtaaaataaatcattctacaagtaatttatctttccttgtaccttcatttctcaac
ttttcatttagtgaggatgatcctttggtacaaattagtatagacaacagtagaaatatc
ttatttgctagaacagagaaaggcaatcttcaggtgtttgatttaggtgaagatggtaaa
ggaatgggaagagttgcttccctttcacatcaaaatattactcagagtgctttcctcata
gccagaactattgataaatcaaactataaaactatagttagtatatcagctttaactaaa
tcagaatcatctaatatacatctagtagctgttactatgtcaggtgtacgtctgtatttt
acaactaatccgtttggtggaggtaaatcgaggcctactatgttaacattagtacatgtt
agattacctcctgggttctcagccaattctactatctctagaccagctaatatagctaaa
tcatcctactctaaaggtgtattgatgatggtagcaggacagaatgagattaatgatata
ttatggtgtgttagtaatgatacattccctatacaatcacaactaatggaatcatatact
gctctaacaatagatggaccaacctgggctatgtctgaagtaccaataaagtctataaat
accagaatatcaacctctagtatgtttgataaatctgatccacctatagttgtcaatcaa
catattgaatcttgtcgaaaatttgtattactcacatcacaggggagtcgtatatttaat
aaactacgtccagtagaacagctacaacaattattgatagaaagtcaaggtccagattca
gaggaagttaaaggtttctttagattacatagggttgaacaagcctgtgctacatgttta
atattagcctgtagtcgaactgctgctgatcctaaggtgtctgattgggcgagaatggct
ttctttacgtatggtggtgagcctcaatatcattatccacctacacatggtttacaacct
tcaaatatcggagcaacatattccagtagtgtactggccactccaagttccagtgtagtt
tatagcccttactctccatataatactaatgccagtttatcacagactttacaaacacca
catccaggaatgcatccagctcacatgtcgacaccagctccaggttttaaccagtcgtat
tttcaaccatcaatgatggggaatataagtacaggaggtggtccactacaagatatacta
tattctggtaaacataatggtatctgtatatatctaggtagaatattacgaccattttgg
gatgtagcagccacaatagaattcccctgtcaaacagaacagggtttagtttattatttg
agcagtagttttaatacagatgaaatcaaccagactttagaactagtcagagatttatct
gattttgtagaatttaatgcacaagttgattttggtggagctgctgaaagtatgacatca
ggttttcctggaagaataatgggagtaagatattcagatggtatgatggatgatcaaacc
aggaagaaattagcgaatgaagcccagaaacttgagaagatatcattacagaatgttaga
atgttattacatcaggtagaagaagttctgggtttgtggaaagttctagttgatcatcag
ttccatgtattagctgcagctcttactaaggaccaacagaatcagttacgttccatgaca
tttaaaaacctggtaattaatgggagagagttatgtgcagcattaataacttgtttaata
acgagatttctacaagataatgctaagatagataatatcagttctatattacgtaatgtt
tgtcctaatttatatagtacagatgatgctacctgttctatggctaatgaattactccat
gcttcgaaagccaatcagaatcaaggagaaaaacaaagacagttatacgaagctttgagg
ttatttaaagatgtgaatcagcctctacagttaactactgtatgtaatcagctagctagt
gttaatttctaccagggtatagtggacctgtgtttaactgaggctaataaacttgaccct
caaaacctagctctacacttctatagatgttgtgaacccccagaagatcagcagggcatg
caggcctttataaacagaatggaatgttataaatgtataacagaaacattaggatattta
tggtcagccagtactagtcatccacaggctcccagtgtacctaaatcaccaggtccacca
gaagcacctgatcttaccagaatctctccagttcaggctgaacaatatagaaatgaagtg
ttcctactggcgttaaaatcagatgatgagttattccatgtagccctgtatgattggtta
tttatggcaaatcattcagagaaattattagagagtcagtttatggaatcatatttaaaa
agaaagtctggtatccaaggtgataatgtagcagcattagatatgttatggaaatattat
gaaaagatacacaactttccagcagctgctaaaatattatctagattagctgatagacct
ggtatggatgtaccactacaacagagaatagaatatttatctcgagctattatgtgtgct
aaaagttcaacatctagaatgagctcggctgctgagggagagttcctgcatgaattggaa
gagaaaatggaggtggctagattacagttacaagtacatcgagcattaaataaaataccc
cataaatcacctgttatgaaagaggctctaaatagattagattcggctctgatagatatt
accagattatatgaagattatgctgataattttgatctatctgaatgtaaattagctatt
gtacattgtgctggcttatatgatgctgcattgatagaaaatttatggcagaatattatc
gataaagaatttgacagttttagtaatttagacaatacaagccgagtgactaatattagt
aacagattagttgttatagctcaactctattctgatacggaacgctactttccactgggt
tttattctgaagtatttagaaaggagaagtagtgaattaaatatggatcctcactggatt
tataaagttatgttacagataaacatttcacctgaaaaactgttagaactatatgataga
atgtttaaatctagggatccattttggcagacgatacatcgaccattacatttattacga
gttctacatggttttatgactaattttactactaatcctactactctacctaatatggag
agacgcaggtttataacaatgtgtttagattgtgtatcaagttatctagtagaactacaa
gctaagagtagtactgatcccagtgtacgaaacctagaacagcaatttaaacaattacaa
tttaaactggaacgactagcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (64)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (78)   

Download RDF
DBGET integrated database retrieval system