KEGG   Companilactobacillus ginsenosidimutans: ABM34_01925
Entry
ABM34_01925       CDS       T03990                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
lgn  Companilactobacillus ginsenosidimutans
Pathway
lgn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lgn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ABM34_01925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgn03400]
    ABM34_01925
Enzymes [BR:lgn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     ABM34_01925
DNA repair and recombination proteins [BR:lgn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ABM34_01925
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_4 UvrD_C_2 SH3_13 Viral_helicase1 AAA_11 HHH_5 UvrD-helicase PIF1 nSTAND3 T2SSE AAA_22 SLFN-g3_helicase UvrD_C AAA_12 Herpes_Helicase Mg_chelatase DEAD AAA_29 IMS_HHH AAA_28 AAA_16 RsgA_GTPase HHH NTPase_1 AAA TsaE RuvB_N
Other DBs
NCBI-ProteinID: AKP66428
UniProt: A0A0H4QIF8
Position
340401..342806
AA seq 801 aa
MTETQEKQYFVGTVKAIFFENPDNLFKIFTIKIKKTNTDWNATDIVITGSFGEISEEEEY
KFEGHLVDHPKYGKQFQAETYHHSRPSGRKALINFFAGDEFPGIGKKTAEKIVDKLGDNA
IDKIVRDPNALDFLKLGKEKTKKVVDQIANSNQAEQMLFELSNFGFGNTLSARIYQRYGG
KTLDIINEDPYKLVLEIKGIGFKRADELARQLGIPEDDPRRIKGALIQIVSDIVNGSGDS
YVKKDFLIQRALGTLRSYNTGNDLQEKINDCLKSLVNDGALIVEDNRVYDKDIFESEWSI
AQSMKMIVDSYKGSDWKQSDYDDGLAKVEKQFKVQYDDSQQKAIEAALSHSIFLLTGGPG
TGKTTIINGIVAMYAKLNDATLDPSAEDYSIALAAPTGRAAKHMGETTGLPAMTIHRLLG
LTGTDDDETAEPTLDCKLLIIDEMSMVDTRLFKILITSVPPGTQVVLVGDRDQLPSVGPG
QIFADLIKSEIFPTSILTDIHRQDDSSTIIQLAHDVNQGVVNQDVFINKSDRSFIPVTSR
NVPEVVSQIVSKSGERGFDISDVQILAPMYRGTAGIDNLNSTIQDVVNPMTPKRKEVSVG
NVHYRIKDKVVYLVNSPEDNVFNGEIGIIVGIILAKENTDKVDKIVIDFDGNEVTLDRKD
WISNIALAYCTSIHKAQGSEFEMVILPLVNEESRMLRRNLLYTAITRSKKLLIMVGDQSA
FQQSIQDKSTARNTTLRERLNNVFNKTTGAKNEITKNDEKQVEAVPDNDYLTLDKVMSNA
INPMIGMENITPFDFMKKVNN
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgactgaaactcaagaaaaacaatattttgtcggcacagttaaggcaatcttttttgaa
aatccagataatttatttaagattttcactattaaaataaaaaaaacgaataccgattgg
aacgctactgatattgttattactggaagttttggtgaaatctctgaagaagaagagtac
aagtttgaggggcatttagttgaccatccaaaatatggcaaacaatttcaggctgagacc
taccatcacagtcgccctagtggtcgaaaagcactgattaacttttttgctggggatgaa
tttcctggtataggtaaaaagactgctgaaaagattgtcgataagctaggtgataatgct
attgataaaatagtgcgagatcccaatgctttggattttttaaagttaggtaaggagaag
actaagaaagtagtcgatcaaattgcgaatagcaatcaagctgaacaaatgctgtttgag
ttgagtaattttggattcggaaataccttatcagcacgtatttatcaaagatatggcggt
aaaactttagatattatcaacgaagacccgtataaattagtattggaaatcaaagggatt
ggttttaagagagcggatgaactggcaagacagcttggcattccagaagatgatccgcga
agaattaagggagcattgatacaaatagtatcagacattgttaatggttcaggagattcc
tatgtaaaaaaggatttcttaatacaaagagctctcggcacgctgcgttcatacaataca
ggcaatgacttgcaagaaaagatcaatgattgtttgaaatcactggttaatgacggtgca
ttaattgtcgaagacaatcgagtgtatgataaggatatttttgagagtgaatggtcaatc
gcccagtcaatgaaaatgattgttgattcatataagggtagtgactggaaacaatctgat
tacgacgacggactggcaaaagttgaaaaacaatttaaagttcaatatgacgattcacaa
caaaaggcaattgaagctgctttaagtcattctatatttctattaacgggtggtccggga
actggtaaaacgaccataattaatgggattgtggcaatgtatgcaaaattaaatgatgcc
acgcttgacccttctgcagaagattattcgattgctcttgctgcaccaactggtcgtgct
gcaaaacatatgggtgagactactggtttaccagctatgacaattcatcgtttactagga
ttgacagggacggatgatgatgaaactgcggaaccaacgctggactgtaaattgttgatt
attgatgagatgtcgatggttgatactcgattattcaagattctgattacatcagtgcca
ccaggcactcaagtcgtgttagtgggtgatagagatcaacttccatcagtcggacctgga
caaatttttgcagatttgattaaaagtgagatcttcccaacaagtattttgactgatatt
caccgacaagatgacagttcgaccattattcaattggcacatgatgtgaatcaaggtgtt
gtaaatcaagatgtgtttattaataagtcggatcgtagttttattccggttactagccga
aatgttcccgaagttgtctcacaaattgtaagtaaatctggtgagcgtggctttgacata
tcagatgttcaaattttagcaccgatgtatcgaggaactgccggaattgataatttgaat
tcgacaattcaggacgttgtcaatccgatgacaccaaaacgtaaggaagttagtgtcgga
aatgtccattatcgaattaaggataaggtagtttacttagttaattcaccggaagataac
gtttttaatggagaaattggaattattgtcggtattattcttgccaaagaaaatactgat
aaagttgataaaatagttattgatttcgatggtaatgaggttactttagataggaaagat
tggatttcaaatattgcgttggcatattgtacgtccatccacaaagctcaaggctcggaa
tttgaaatggtcattttaccattggttaatgaagagtctcgcatgttaagacgtaatcta
ttgtatacagcaattacgcgctcgaagaaactactaattatggtaggagatcaatctgct
tttcaacaatcaattcaagacaagtcaactgccagaaacactactcttcgtgaacgtttg
aacaatgtatttaacaaaacaacaggcgctaaaaatgaaattaccaaaaatgatgaaaaa
caggtcgaagctgtacccgacaacgattatttaacgctagataaagtaatgtcgaatgca
atcaatccaatgataggtatggagaacattacaccatttgattttatgaagaaagttaac
aactaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (39)   

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