KEGG   Lysobacter gummosus: LG3211_4004
Entry
LG3211_4004       CDS       T04163                                 
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
lgu  Lysobacter gummosus
Pathway
lgu00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:lgu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    LG3211_4004 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:lgu01007]
    LG3211_4004 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lgu03016]
    LG3211_4004 (aspS)
   03029 Mitochondrial biogenesis [BR:lgu03029]
    LG3211_4004 (aspS)
Enzymes [BR:lgu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     LG3211_4004 (aspS)
Amino acid related enzymes [BR:lgu01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   LG3211_4004 (aspS)
Transfer RNA biogenesis [BR:lgu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    LG3211_4004 (aspS)
 Prokaryotic type
   Other AARSs
    LG3211_4004 (aspS)
Mitochondrial biogenesis [BR:lgu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    LG3211_4004 (aspS)
SSDB
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d tRNA-synt_2b
Other DBs
NCBI-ProteinID: ALN92940
Position
complement(4487710..4489479)
AA seq 589 aa
MRTHFCGLVDEALIGQTVTLCGWVNTNRVQSHVVFTDLRDHEGVVQIVVDSDMADLFKTA
SDLSVESCVRVTGTVRVRGAANDKIRSGKVEVLPSSIEVLNKAEPLPFHAHENAGEETRL
TYRYLDLRRPEMQKMMRTRIRLVQSLRRWLDARGFQDIETPILTKATPEGARDFLVPARM
HPGEFYALPQSPQLFKQILMVAGFDRYYQIARCFRDEALRADRQLEFTQLDMEFAWVSER
DVQDTVEDMIRVVFKESIDVELDAQFPRMTYAEAMRRYGSDKPDLRIDLEFVDIAELVKT
CEFKVFTDWANHPEGRVIALRAPGAGAFSRKQIDEAGAHAAKYGAKGLAWMKIEDAGKGR
EGINSPIAKFLDDATLAKIVEATGAQNGDAIFFGAADYKTASDFMGALRLKLGKDLDLVG
EGWKPLWVTDFPMFEWDEEAQRYVALHHPFTAPAVDDIADLRTNAKTAVSRGYDMVLNGN
EIGGGSIRIHRPQMQSAVFDLLGIGAEEAEAKFGFLLDALKYGAPPHGGIAFGIDRIAAL
MAGTESIRDVIAFPKTTTAQCLMTGAPSKIPDAQLAEVHVMVRPKKDPA
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgcgtacccacttctgcggcctcgtcgatgaggcgctgatcggccagaccgtcaccttg
tgcggctgggtcaacaccaatcgcgtccagagccacgtggtgttcaccgatctgcgagat
cacgaaggcgtggtgcagatcgtggtcgattcggacatggccgacctgttcaagaccgcc
agcgacctgagcgtggaaagctgcgtgcgcgtcaccggcaccgtgcgcgtgcgcggcgcg
gccaacgacaagatccgcagcggcaaggtcgaagtgctgccgagttcgatcgaagtgctc
aacaaggccgagccgctgccgttccacgcccacgagaacgccggggaagaaacccgcctg
acctaccgttacctggacctgcgccgcccggaaatgcagaagatgatgcgcacccgcatc
cgtctggtgcagtcgctgcgccgctggctcgacgcgcgcggcttccaggacatcgaaacc
ccgatcctgaccaaggccacgcccgaaggcgcgcgcgacttcctggtcccggcgcgcatg
catccgggcgagttctacgcgctgccgcagtcgccgcagctgttcaagcagatcctgatg
gtggccggcttcgaccgttactaccagatcgcgcgctgcttccgcgacgaagcgctgcgc
gccgaccgccagctcgaattcacccagctcgacatggagttcgcctgggtgtccgaacgc
gacgtgcaggacacggtcgaggacatgatccgggtcgtgttcaaggaaagcatcgacgtc
gaactcgacgcgcagttcccgcgcatgacctacgccgaagcgatgcgccgctacggctcg
gacaagcccgacctgcgcatcgatctggaattcgtcgatatcgccgaactggtcaagact
tgcgagttcaaggtcttcaccgattgggccaaccaccctgagggtcgcgtgatcgcgctg
cgggcgccgggcgcgggcgcgttctcgcgcaagcagatcgacgaagccggcgcgcacgcg
gccaagtacggcgccaagggcctggcgtggatgaagatcgaagacgccggcaagggccgc
gagggcatcaactcgccgatcgcgaagttcctcgacgacgcgacgctggcgaagatcgtc
gaagccaccggcgcgcagaacggcgatgcgatcttcttcggcgcggccgattacaagacc
gcgagcgacttcatgggcgcgctgcgcttgaagttgggtaaggatctggatttggtcggc
gaaggctggaagccgctgtgggtcaccgacttcccgatgttcgaatgggacgaagaggcg
cagcgctacgtcgccctgcatcaccccttcaccgcgccggcggtggacgacatcgccgat
ctgcgcaccaacgccaagaccgcggtgtcgcgcggttacgacatggtgctcaacggcaac
gagatcggcggcggttcgatccgcatccatcgtccgcagatgcagtcggcggtgttcgat
ctgctcggcatcggcgcggaggaagccgaggcgaagttcggcttcctgctcgacgctctg
aagtacggcgcgccgccgcacggcggcatcgccttcggtatcgaccgcatcgccgcgctg
atggccggtaccgaatcgatccgcgacgtgatcgcgttcccgaagaccacgaccgcgcaa
tgcctgatgaccggcgcgccctcaaagattccggacgcgcagctggcggaagtgcatgtg
atggtgcggccgaagaaagatccggcttga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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