KEGG   Lactococcus garvieae Lg2: LCGL_0347
Entry
LCGL_0347         CDS       T01963                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lgv  Lactococcus garvieae Lg2
Pathway
lgv03410  Base excision repair
lgv03430  Mismatch repair
lgv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lgv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LCGL_0347
   03430 Mismatch repair
    LCGL_0347
   03440 Homologous recombination
    LCGL_0347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgv03400]
    LCGL_0347
DNA repair and recombination proteins [BR:lgv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LCGL_0347
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LCGL_0347
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LCGL_0347
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 TPP_enzyme_N HTH_psq Glyco_transf_4
Other DBs
NCBI-ProteinID: BAK59807
UniProt: F9VBV6
Position
352180..354414
AA seq 744 aa
MIKSKYIWKLTESDLPDEFLKLSKKYKLDTLAAQILWQRGIRAEEEIQAYLNPDLQQLHD
TFLLHDMEKATQRILTAIENGQNILIYGDYDADGMTASSVMKSALDELGAEVQVYLPNRF
TDGYGPNLDVYKYFIQNEDIDLIITVDNGVAGHEAIAYAQSQNVDVIVTDHHSMPEELPK
AFAIVHPEHPESNYPFKYLAGVGVAFKVATALLDYIPSDMLDLVAIGTIADMVSLTDENR
ILVSHGLKVLANTERAGLMELMRLSGTDFEKVNEETVGFQIAPRLNALGRLDDPNPAIEL
LTGWDEEVAAEIAQMIDEKNSERKVIVENIYNQALTMMTDEPIEVLYHPDWHKGVLGIVA
GRLLEQFHKPIIMLAEEEGILRGSARSIENFNIFEALNGHRELFIAFGGHKQAAGMTFAL
ENVEAIKQVMLEFIQENDIDMSEKSSLEVQGSLQFDQISLETIRSLEKLSPYGMDNPKPH
FLLTDYQVEQARSMGKDNSHLKLKLVQNGQALDAVYFGHGSESLEFEQSDTELVGTLSSN
TWNGTTTVQLMVADARVNGVELLDIRSRQVELPKNTIRFVHNEVKNGTIEEVLIIEEAPT
DKDALSALTELIHEQDFELIYFKNTIKKNYYLTGAGTREQFARFYKAIYQYPEFDIRFKL
KDLANYLKIPDILMVKMIQIFEELNFVTIDNGMMSVNKAAEKRDISESNIYQELQEIIAF
QELFALSPVKEIYKKLKEEDAHAT
NT seq 2235 nt   +upstreamnt  +downstreamnt
ttgattaaatcaaaatatatatggaagttaactgagtcagacttaccggatgagtttctt
aagttaagtaaaaagtataaattagacacactggcagcgcaaattttgtggcaacgcggc
ataagggcagaagaagagattcaagcttacttaaatcctgatcttcagcaattacatgat
acgtttttgctgcacgatatggaaaaagccactcaaagaattttgactgccattgaaaat
ggacaaaatatcttaatatatggggattatgatgcggatggtatgacggcgagttccgtg
atgaaatcagctttggatgaattgggagcggaagtacaggtctatcttcctaaccgcttt
accgatgggtacggaccaaatcttgatgtctataaatatttcattcaaaatgaagacatt
gacttgattattacagtggataatggtgtagctggtcatgaagctatcgcctatgcacaa
agtcaaaatgttgatgttattgtaactgaccaccacagtatgccagaagagctgcccaaa
gcttttgcaattgtgcatcctgaacacccagaatcaaactatcctttcaagtatttggcc
ggagtaggggttgcttttaaagtcgccaccgcacttttagactatattccttcggatatg
cttgacttggtggcaatcggaacaattgcggatatggttagtctcaccgatgaaaatcgg
atcttggtgagtcacggactaaaagtattagcgaatacagagcgtgcaggcttaatggaa
ctcatgcgcctctcaggaaccgattttgaaaaggtgaatgaggaaacggttggttttcaa
attgccccccgtttgaatgctctaggacgcttagatgatccaaatcctgcaattgaacta
ttaacgggctgggatgaagaagtggctgccgaaattgcgcaaatgattgatgaaaaaaat
agcgagcgtaaagttatcgtagaaaatatctacaatcaagccctcaccatgatgacggat
gaacccatagaagttctttatcatccggattggcataaaggtgttctaggtattgttgca
ggacgcttacttgagcaatttcacaaacctatcattatgttggctgaagaagagggaatt
cttcgaggttcagcacgttcgattgaaaactttaatatttttgaagcactcaatgggcac
cgtgagctttttatcgcttttgggggtcacaaacaggcagctggaatgacttttgccttg
gagaatgtggaagcaatcaagcaagtgatgctcgagtttatccaagaaaatgacattgat
atgtcagagaaaagttcactagaagttcagggcagcctacagtttgaccagattagctta
gagacgattaggagtttagagaagctatctccttacggtatggataatccgaaacctcat
tttctccttacggattatcaggttgagcaggcgcgtagcatgggaaaagacaacagtcat
ctcaaacttaaattagtacaaaatgggcaagctttagatgcggtttactttgggcatggg
tctgaaagcctggaatttgaacaaagtgacacagaacttgtcggtaccttatcgagcaac
acttggaatggtacaacaaccgtacagcttatggtggctgatgccagagtaaatggtgtt
gaacttctggatattcgaagtcgacaagttgaattgccaaaaaatacaatacgttttgtc
cataatgaagtgaaaaatggtacaatagaagaagtgcttattattgaggaagccccaaca
gataaggatgccttatctgctttgacggaactaatacatgagcaggattttgaattgatt
tatttcaaaaatacaatcaagaaaaattattatttgacgggagcggggacgcgtgagcag
tttgcacgcttctataaagcaatctatcagtatcctgagtttgatattcgttttaaattg
aaagacctagcaaattatttgaagatccccgatattttaatggtaaagatgattcaaata
tttgaagaactgaattttgtcaccattgataatggcatgatgagtgtgaataaagccgct
gaaaagcgtgatatttctgaaagtaacatttaccaagaacttcaagaaatcattgccttt
caagaacttttcgccttatcccctgtcaaagaaatttataaaaaattaaaagaggaagat
gcacatgcaacttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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