KEGG   Lysinibacillus varians: T479_08890
Entry
T479_08890        CDS       T03062                                 
Name
(GenBank) DNA-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
lgy  Lysinibacillus varians
Pathway
lgy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    T479_08890
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lgy02000]
    T479_08890
Transporters [BR:lgy02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    T479_08890
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: AHN21543
UniProt: A0A806LPS7
Position
1861980..1863539
AA seq 519 aa
MKQSRNWVFLMLLLLLGVMFSACSNDNDKKDTNKVPTNAPVTTDTPQEIVVRINDDPDFL
DPHKATASISYQMILNIFEGLMAPETDGSLKEGLAESYEISQDGLTYTFKIRSGVKFHNG
EDLTIEDIQYSFDRLMGKNGGEKMSNNFDNVASTEAPDTTTFVIKLKEPNSNFLYSLTAR
QAAIIPKSNDGKHNENPIGTGPFAYVKYAPGSNLVLKKNESYWKEGLPYLNKVTFTFQSD
DQAAIMSLMANEVDLTSVPWQRVNEVENSHHLSHQNNNSSLIVTFNETKAPFDNIKVRQA
MNYAISKADIIDSVFAGYAVPLGSNMSPAMGDYQKKGLEDKYKLDVAKAKALLAEAGYPD
GFKTKITVSSHNDIYSNIAQIVAANLKEIGVDVEIEVVEWGIWLDRVYFGRDYTMTTIDL
TGRASAYEILNDYISTNDSENFFLFKNEEYDNIMADVLKETDTAKQIAYYQRAQEILAEQ
AVSVYVADYQIVWGSDKQVTGLKSYPFWFHDMSEVKFSN
NT seq 1560 nt   +upstreamnt  +downstreamnt
ttgaagcagagtagaaattgggttttcctaatgttgttattgcttttaggggtgatgttt
agcgcatgttcaaatgataatgacaaaaaagatacaaataaagtaccgacaaatgcgcca
gtaacaacagatacaccgcaagaaattgtagtccgcattaatgacgacccggatttttta
gatcctcataaagcaacagcctcgatttcctatcagatgattcttaatatttttgaagga
ttgatggcacccgaaacagatggctccttaaaagaagggcttgcggaaagctatgaaatt
tcacaggatggtttaacttatacgtttaaaattcgttcaggtgtgaaatttcataatggc
gaggatttaacaatagaagatattcaatattcgtttgatcgcttaatgggcaaaaatggt
ggcgaaaaaatgtcgaataactttgataatgtagcatctaccgaagccccagatacaacg
acttttgtcattaagttaaaagaaccgaattccaatttcctctattccttgactgctcgc
caagccgccattataccgaaaagtaatgacggcaagcataatgaaaacccaatcgggact
ggtccttttgcttatgtgaaatatgctccaggctcaaatttagtgttgaaaaagaatgaa
agctattggaaagaaggcttgccttacttaaataaagtaacttttacgttccaatccgat
gatcaagcagccattatgagcttaatggcaaatgaagttgatttaacaagtgtcccttgg
caacgggtaaatgaggtggaaaatagtcatcatttatcgcatcaaaacaataactcttct
ttaattgtcacgtttaatgaaacaaaagcaccgtttgataatatcaaagtgcgtcaggcc
atgaactatgccatcagtaaagcggatattattgattctgtctttgctggttatgctgta
ccacttggctcgaacatgagtccagcaatgggagactatcaaaagaaagggttagaagat
aagtacaagcttgatgtggcaaaggccaaggcattattagctgaagcagggtacccagac
ggctttaaaaccaaaattactgtatcttctcataacgatatttattccaatatagcgcaa
attgttgccgctaacctcaaagaaattggtgtagatgtagagattgaagtggtggaatgg
gggatttggcttgatcgtgtgtactttggtcgcgactatactatgacgacgattgattta
acaggtcgtgcctctgcctatgaaattctaaatgactatatttctaccaatgacagtgaa
aacttcttcttatttaagaatgaggaatacgacaacatcatggctgacgttttaaaggaa
acagacacggcaaagcaaattgcttattaccaacgtgcacaagaaattttagcggagcag
gcagtgtcggtttatgtagcggattaccaaatcgtctggggttctgacaagcaagtaaca
gggctaaagagctatccattctggttccatgatatgtccgaggtaaaattctcaaactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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