KEGG   Lysinibacillus varians: T479_16565
Entry
T479_16565        CDS       T03062                                 
Name
(GenBank) ATP-dependent protease
  KO
K03544  ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
lgy  Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lgy03110]
    T479_16565
Chaperones and folding catalysts [BR:lgy03110]
 Heat shock proteins
  HSP100
   T479_16565
SSDB
Motif
Pfam: AAA_2 zf-C4_ClpX AAA ClpB_D2-small AAA_5 Mg_chelatase MCM RuvB_N AAA_22 Sigma54_activ_2 Sigma54_activat AAA_14 IstB_IS21 AAA_16 TIP49 AAA_18 nSTAND3 NACHT AAA_28 DEAD T2SSE ABC_tran TsaE AAA_7 PduV-EutP ResIII AAA_24 AAA_33 AAA_21 PhoH AAA_25 RNA_helicase FtsK_SpoIIIE AAA_29 C1_2
Other DBs
NCBI-ProteinID: AHN22751
UniProt: A0A806LKM7
Position
complement(3271654..3272925)
AA seq 423 aa
MFKFNDEKGNLKCSFCGKPQEQVRKLVAGPGVYICDECIELCSEIVVEELGVEEEIDFQD
IPKPKEILSILNEYVIGQERAKKALAVAVYNHYKRINTNSKIDDVELAKSNIVLIGPTGS
GKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQSADYDIERAEKGIIYI
DEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFLQIDTTNI
LFIVGGAFDGIESIIKRRQGEKVIGFGSDPNKVEVDEGSLMSKLIPEDLLKFGLIPEFIG
RLPVLASLEQLNEAALVQILTEPKNALAKQYQKMLELDGVELEFDEGALSEIAKEAIERK
TGARGLRSIIESTMLEVMYELPSRDDVKKCIITAKTITDKEKPKLLLEDGTELDEGSDTK
TSA
NT seq 1272 nt   +upstreamnt  +downstreamnt
ttgttcaaatttaatgatgaaaaaggcaatttaaaatgctcattctgtgggaagccgcag
gaacaagtacgtaaattagttgcaggtcctggtgtttatatttgtgatgaatgtatcgaa
ctttgttcagaaatcgttgtagaagaactaggtgttgaggaagaaatcgatttccaagat
attccgaaaccgaaagaaatcttatcgattttaaatgagtatgttattggacaagagcgt
gctaaaaaagccttagcggttgcggtttacaatcactacaaacgcatcaatacaaacagt
aaaattgatgatgtagaattagcaaaatcgaacattgtgttaatcggcccaactggtagc
ggtaaaacattattagctcaaacattagcacgtatattaaacgttccattcgcaattgca
gacgctacttctttgacagaagctggttatgtgggtgaagacgttgaaaatatcttatta
aaattaatccaatcagcagattatgatatcgaacgtgcagaaaaagggatcatctatatt
gatgaaatcgataaagttgcacgtaaatcagaaaatccatcgattacacgtgatgtgtct
ggagaaggtgtccaacaggcattgctaaaaattttagaaggtactgttgcaagtgtgcct
cctcaaggcggacgtaaacatccacaccaagagtttttacaaattgatacaacaaatatt
ttatttatcgtaggcggagcatttgatggtattgaatccatcattaaacgtcgtcaaggt
gaaaaagtgattggtttcggttcagatcctaataaagttgaagtggacgaaggttcatta
atgtcgaaattaattcctgaagatttgttgaaatttggtctaattccagaattcatcggt
cgtttgccagtacttgcaagcctagaacaattgaatgaggctgcacttgtacaaattttg
acggaaccaaaaaatgcgctagcgaagcaatatcaaaaaatgcttgaactagatggtgtt
gagcttgagtttgatgaaggtgccctttctgaaattgcaaaggaagcaattgagcgtaaa
acaggtgcacgtggtcttcgttcaattattgagtcaacaatgcttgaagtaatgtacgaa
ttaccttcacgtgatgacgtgaaaaaatgtatcattacggcaaaaacaattacggataaa
gagaaaccgaaattgcttcttgaagatggcactgaactcgatgaaggtagcgacacaaaa
acttcagcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (35)   
   Pfam (35)   
All databases (42)   

Download RDF
DBGET integrated database retrieval system