KEGG T03777: HUO

Lactobacillus helveticus KLDS1.8701: HUO_00870

Entry

HUO_00870         CDS       T03777

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

lhd Lactobacillus helveticus KLDS1.8701

Brite

KEGG Orthology (KO) [BR:lhd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lhd03032]
    HUO_00870 (gyrB)
   03400 DNA repair and recombination proteins [BR:lhd03400]
    HUO_00870 (gyrB)
Enzymes [BR:lhd01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HUO_00870 (gyrB)
DNA replication proteins [BR:lhd03032]
Prokaryotic type
  DNA Topoisomerases
   HUO_00870 (gyrB)
DNA repair and recombination proteins [BR:lhd03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HUO_00870 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

AJY60636

UniProt:

A0A0D5MFM3

Position

167049..169013

AA seq 654 aa
MADNSKKNLDKVKKYEKEADKYNASQIQVLGGLEAVRKRPGMYIGSTSSQGLHHLVWEII
DNSIDERLAGFATKIEITVNEDGSVTVQDDGRGIPVDIQKKTGRPALETVFTVLHAGGKF
GGGGYKVSGGLHGVGASVVNALSTKLDVTVMRDGKKYFIDFDHGRVKDEMKQIGTVPLEQ
HGTIVHFYPDPDIFTETTTFDDKILKNRIRELAFLNKGLKLTFTDKRKDSAETDVYKYEG
GIKEYVAFLNKGQEVLFDEPIYVESTYNGIDVEVALQYTNGYKTTLMTFANNIHTYEGGM
HEAGFKTALTRVVNDYAHKAKILKDKDDNLSGEDIREGMTAVVSVKHPSPQFEGQTKTKL
GNSDARTAVDKSFSETFSRFLMENPSVGRKIVEKGQLAERARTAAKHAREVTRKKSGLEI
ANLPGKLADNTSNDPSISELFIVEGNSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDR
ILANQEIRSLFTALGTGFGADFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYNYMRPM
IEKGYVYIARPPLYQVRQGKVIKYLDTDEELHDYLGSLQPSPKPVVQRYKGLGEMDPEQL
WETTMNPENRRLDRVSPEYAKDADAVFELLMGNEVAPRRDFIQKNAKYVENLDA

NT seq 1965 nt +upstreamnt +downstreamnt
atggctgataattcaaagaaaaatcttgataaggtcaaaaaatatgaaaaggaggccgac
aagtataatgctagtcaaattcaagtcttaggcggcctggaggctgttcgtaagcgacca
ggtatgtatatcggttcaactagttctcagggattgcaccacttagtgtgggaaattatt
gataacagtattgatgaacgccttgctggttttgctaccaagattgaaattactgttaat
gaggatggtagtgttactgttcaagatgatggtcgtggtatcccagtagatattcaaaaa
aagacaggtcgtccagctttagagactgtatttactgtacttcacgccggtggtaaattc
ggcggtggcggatataaggtatcaggtggtcttcacggtgttggtgcatctgttgtaaat
gctttgtccacgaagcttgatgtaactgtcatgcgtgacggtaaaaagtatttcatcgat
tttgatcacggccgcgttaaggatgaaatgaagcagattggtactgtgccacttgagcaa
catgggactattgttcatttctatccagatcctgacatttttactgaaactactactttc
gatgacaagatcttaaagaatagaattcgtgaacttgcatttttaaacaagggattgaaa
cttacttttacagataagcgtaaagatagtgccgaaaccgatgtatacaagtacgaaggt
ggtattaaagaatacgttgcctttttgaacaaggggcaggaagtattatttgatgaacct
atctatgtcgaaagcacatataacggcattgacgtggaagttgctttgcaatatacaaat
ggctacaaaactactttaatgacctttgccaacaatatccatacctatgaaggcgggatg
cacgaagccggcttcaagactgctttgactcgtgttgtaaatgattatgctcataaggca
aaaatcttaaaagacaaggatgataacctttctggtgaagacatccgtgaagggatgacg
gctgttgtttcagttaagcaccccagccctcaatttgaagggcagactaagacaaaattg
ggtaactcagatgctagaacagcagtagataagtcattctctgaaacctttagtcgcttc
ttgatggaaaacccatcagttggacgcaaaattgtggaaaagggtcaacttgccgaacgt
gctagaaccgctgctaagcatgcacgtgaagttactcgtaaaaagtctggtttggaaatt
gcaaacttgccaggtaaattagccgataatacaagcaatgatccaagtatttctgaatta
ttcatcgttgagggtaactcagccggtggttcagctaagcaaggtagatctcgtttaacc
caagccattttgccaatcagaggtaagattttaaacgttgaaaaagcttcaatggatcga
attttggccaaccaagaaatcagatctttgtttacagctttaggtacaggatttggtgcg
gactttgatgtgtctaaagcacgttatcataagttgattattatgactgatgccgatgtc
gatggtgctcacattagaactttgcttttgacgctgttttacaattacatgcgtccaatg
attgaaaaaggatatgtatacatcgctcgtccacctctgtaccaagtccgtcagggcaag
gtaattaagtatcttgatactgatgaggaattgcatgattacttaggtagtttgcagcca
agtcctaagcctgttgtacagcgttacaaggggttaggtgaaatggacccagagcagtta
tgggaaactactatgaatccagaaaatagacgtttggatcgagtaagtcctgaatatgcc
aaggatgcagatgcagtctttgaactcttaatgggtaatgaagttgctccaagacgtgac
tttattcaaaagaatgctaaatatgttgaaaatttggatgcatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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