KEGG   Lactobacillus helveticus KLDS1.8701: HUO_06535
Entry
HUO_06535         CDS       T03777                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
lhd  Lactobacillus helveticus KLDS1.8701
Pathway
lhd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lhd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HUO_06535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lhd03400]
    HUO_06535
DNA repair and recombination proteins [BR:lhd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HUO_06535
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HUO_06535
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind SMC_N DnaJ_CXXCXGXG nSTAND1 AAA_15 AAA_21 AAA_29 RsgA_GTPase ATPase DUF463 nSTAND3 cobW DUF4350
Other DBs
NCBI-ProteinID: AJY61519
UniProt: A0A0D5MJ51
Position
complement(1261166..1263670)
AA seq 834 aa
MALPKQIEVRGAKVHNLKNIDVNILLHKFVAISGLSGSGKSSLAMGILYEEGSRRYLDAL
STYMRRRIKQGAQADVTSVKHIPSALALRQRPSVPNERANVGTTTETFNVLRLIFSRLGS
PICPNGHRVAPSLAIAEAMSKSGEEMGRITCPTCGVKFYVPSAEEFAFNSDGACTECGGT
GKVRQLDENKLIADENLSIEDGAVASWSLPGRNFMPSVAEHAGVRINVPFKDLTDKEKNF
VLNGPEKKYKMDFLSGTGRVFHDFNALYENAHQAVLRSAKSSKSERAQKRIAEFFTYSTC
PVCHGTRLRPELLKQLVNGKNIDEVEHMQLGDLPAWSKEVLAKLPEEMHQMASSLIKEFI
NNLQPLLDLGLDYLTMARAGNTLSTGELQRIQLARTLRTETTGVLYVLDEPSIGLHPANV
DGLIKVLRKLVDQGNSLVVVDHNVDIIKAADEIIEIGPGSGEQGGQILAQGTPRELEDNK
KSLIAPYLNGKADLMARKTTDKINSDQIKFEIEHYFNLHDIKAGIPVNQITAVTGFSGAG
KTSLILDSLVPAIEAQAKGEKLPKQIKKFSSPVHNVVSVDATPIGKSTRSTVATYTSIMD
NLRKLFARQPLAKEKHYTPSYFSYNNKEGACPTCGGTGIVTLDIQFLPDMQQTCPTCHGE
RYNPAIQQVKWHGMSIVDVLNLDINEALPVFKKAPKIERELKLLKEVGLDYLHLGESTPT
LSGGEAQRLKLVTHLSHKQDDTLFVFDEPTIGLHPLDVKVLVTVMQKLLDQGATILTITH
DLNLIVNSDYILDLGPHGGKAGGRIVAEGMPRELVKHPDSLTTRYLADYWKQFE
NT seq 2505 nt   +upstreamnt  +downstreamnt
atggcattaccaaagcaaattgaagttagaggagcaaaagttcacaacttaaaaaatatt
gacgtcaatattctgctgcataagtttgtagctatttcaggattgtctggatcggggaaa
tcatccctagctatgggaattctttatgaagaaggatcgcgccggtatcttgatgcactt
tctacatatatgagaagacgaattaagcagggggcacaagctgatgttacttcggttaag
catattccgtcagcattggctctgcgtcagcgtcccagtgttcctaatgaaagagcaaat
gttggtacaacaactgaaacttttaatgtcttgcgcttgattttttcacgacttggttca
cctatctgtcctaatggtcaccgagttgcaccaagtctggcaatagctgaagcaatgtcg
aaatccggcgaagaaatgggacgaatcacttgtccaacttgtggcgtaaagttttatgtc
ccaagcgctgaagaatttgcatttaattcagacggtgcatgtactgaatgtggcggtaca
ggcaaggtgcgtcaacttgatgaaaataaattgatcgctgatgaaaacttatcaattgaa
gacggcgcagttgcttcgtggtccttaccagggcgtaatttcatgcctagtgtggcagag
cacgcaggagttcgtatcaatgttccatttaaagatttaactgataaagaaaaaaacttt
gtcttaaatggtccagaaaagaaatataagatggactttttatcaggcactggccgcgtg
ttccatgactttaatgctctttatgaaaatgctcaccaggcagttcttcgttcagccaag
agtagcaagagtgaacgtgcacaaaagagaatcgccgaattcttcacttattcaacttgt
cctgtttgtcatggtacacggcttcgtcctgaattactcaagcaattagttaatggcaag
aatattgatgaagttgaacatatgcaactaggtgatttgcctgcttggagtaaagaagtt
ttagccaaattaccggaagagatgcaccagatggcatcttccttgatcaaggaatttatc
aataatttgcagccattgcttgatttgggcttagattatttgactatggctcgagcagga
aatacactttcaaccggtgaattgcaacgaatccaattggccagaactttaagaacagaa
actactggcgttctttatgtattagatgaaccatcaattgggctccatcccgctaacgtc
gatggtttgattaaggttttgcgcaaattagttgatcaaggcaattctttggtcgtggtt
gatcataatgtcgatattattaaggcagccgatgaaatcatcgaaatcggaccaggatct
ggtgaacaaggtggtcaaattctagctcaaggtacgcctcgagaattagaagataataaa
aaatctttgattgcaccatatttaaatggtaaagctgatttgatggcaagaaaaacgact
gataagattaatagcgatcaaataaaatttgaaatagagcattatttcaacttacatgat
attaaagctggtattccagttaatcaaattactgcagtgacaggcttttctggagcaggt
aagaccagtttgattttggattccttagttccggctattgaggcacaggcaaagggcgag
aagttacctaaacaaattaagaaattctcttcaccggttcataatgtagttagtgttgat
gcgactccgattggtaagagtacccgttcaactgtagcaacatatacttcaatcatggat
aatctgcgtaagctttttgctcggcagccactagcaaaagaaaagcattacacgccaagc
tacttctcttataacaataaagaaggagcttgcccaacttgtggtggaacgggaattgtg
acgttagatattcaatttttgccagatatgcagcagacttgtcctacttgccatggtgaa
cgttataatccagcgattcaacaagtaaagtggcacggaatgtcaattgttgatgtgctt
aatttagatattaatgaagcactacctgtgttcaaaaaggcaccgaagattgaacgagaa
ttgaaattgttaaaagaagtcggtttggattacttgcatttaggtgaaagtacaccaact
ttatctggtggtgaagcacaaagattgaagctggttactcatttgagtcataagcaagat
gatactttgtttgtcttcgatgaaccaacgatcggtttgcatcccttagatgtgaaggtt
ttggtaaccgtaatgcaaaaattgcttgatcaaggtgcaaccattcttacgatcacacat
gatttgaatttaattgttaatagcgattatattttggatctaggaccacacggcggtaaa
gctggtggtagaatcgtggctgaagggatgccacgagaattagtcaagcatccagatagt
ttaactacacggtatttggctgattattggaagcaatttgaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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