KEGG   Lactobacillus helveticus DPC 4571: lhv_0028
Entry
lhv_0028          CDS       T00625                                 
Name
(GenBank) Type III restriction-modification system restriction subunit
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
lhe  Lactobacillus helveticus DPC 4571
Brite
KEGG Orthology (KO) [BR:lhe00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lhe02048]
    lhv_0028
Enzymes [BR:lhe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     lhv_0028
Prokaryotic defense system [BR:lhe02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   lhv_0028
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD partial_CstF DUF5759
Other DBs
NCBI-ProteinID: ABX26320
UniProt: A8YW63
Position
30519..33530
AA seq 1003 aa
MKINYEKLDYQENAVKAVINTLSNHDETATKLILNSDYLDNSVRETLLNNGQKYPGSGYL
NPFPQFNIEMETGTGKTMVYLQTIMALHKRFHENKFIIVVPSRAIKAGVEDNLKKVQVYL
SDIYNTDKYHYFVYDSKQIAQLQSFEGNGFEIMLTTIQAFNKNTNVINQEYNEGFFGGKP
LDQIREANPIVIIDEPQSVDSAKAGKKAIASLNPKLALRYSATHKEKQYPMLYEYGPVQA
YKDRMVKHIETLGTEVNTNGNIPFIELKEQPEFKNGRLQAKVLAYKQVKDDFLKRTVTLK
KGDSLAEKAKNPRYERLGKVTAIDSGNNFIEFENGYHAEVGALEGENDIWVSAQMEALVR
DHLDRELRMQDQGIKVLSLIFLDQVKNYRIYTKDGYEKGIYAKLFERIYEKVLHSDPKYK
KLNDYNVPVAEVHDGYFAQDRATRNKPAMYRDTKGDTTKDETAYGAIMDDKEGLLTKYIP
GKPETNTKAAKLRFIFSHSALKEGWDNPNVFQILTIATPKNDLTRRQKIGRGLRIPVNQE
GKRVYNENQNIVTIYANETFEEFAAGLQNEYLEDGLLSNRIDEDFFTNMVVSKSVTNTED
VLTNKKEEKEIENVNEEKSTTDKTRKVTHHESVTFANVLKQNNIINNNSKPTARGLNSLS
NNTIKKKIVDQSVSEGIEAATAKRMMSIVFDRFNVPKPRDRRDRTTVQLIDKNNSYFNAL
WNKISYKVRYHIKFNEDELINAIVNGNNPLKDIKITRMTAVQTRARVDLNTTNVKDRVIS
QNTEHLTWNDMPIMDVTRQLADKTGLTRKAIIKMILLTKKKDSSFIKKIKMNPALFVNRA
YQRIRMHEQNLLSHSLVYIQTGEKWSKDLFKPFDASDNTLWKVPERGLKKTLFDKIPTQS
QEERKFAESLVNEEKIKYFFKLPNWFKIPTPFGNYNPDWAILAETNGIEKLYFVIDTKTT
EEKGTLRSGEQTKLNAGAQAYKAEGFEDVRFEAPIKVIGDLDL
NT seq 3012 nt   +upstreamnt  +downstreamnt
atgaaaattaattacgaaaaactagattatcaagaaaatgcagttaaggctgtaattaat
acattgtctaatcatgatgaaactgcaactaaattaattttaaactctgattatttagat
aattctgtacgtgaaacattgttaaataatggacaaaaatatcctggttcaggttatctt
aatcctttcccacagtttaatattgaaatggaaactggaacaggtaaaacaatggtttac
ttacaaacaattatggcactgcataagcgctttcatgaaaataaatttataattgttgtt
cctagtcgagcaattaaagcaggggtagaggataacctgaaaaaagtccaagtttattta
agcgacatctataacacagataaatatcattattttgtttatgattctaaacaaattgca
caactgcaaagttttgaaggcaatggcttcgaaataatgctaactactattcaggctttt
aataaaaatactaatgtaattaaccaggaatataatgaaggcttttttggtggaaagcca
ttagatcaaattagagaagcaaatcctatagttattatcgatgaaccacagtctgttgat
agtgctaaagcagggaaaaaagctattgcatccttaaatcctaaattggcactgcgatat
tcggcaacacacaaagagaagcaatatccaatgctttatgaatatggtccagttcaggca
tataaggatcgcatggtaaagcatattgaaactctgggcacagaagtaaacacaaatgga
aatattccatttatcgaattaaaagagcaacctgaatttaaaaatggtagattacaagca
aaagtacttgcttataagcaagtaaaagatgattttttaaaacgtactgttactttgaaa
aaaggtgattcattagctgaaaaagctaaaaatcctcgatatgaaagattaggtaaggtt
actgcaatagattcaggcaataactttattgaatttgagaatgggtatcatgctgaagta
ggtgcacttgaaggtgaaaatgatatctgggttagtgcccaaatggaagctttagtcaga
gatcatttagatcgtgaactgagaatgcaagatcagggtatcaaggtattatcgcttata
tttcttgatcaagttaaaaattatcgtatttatacgaaagatggctatgagaaaggtata
tatgccaaactttttgaaagaatatatgaaaaagttttgcatagcgatccaaaatataaa
aaattaaatgactataatgttccagttgctgaagtacatgatggttattttgctcaggat
agagcaactagaaataaaccggcaatgtatcgtgataccaaaggcgatactactaaggat
gaaactgcttatggtgcaataatggatgataaagaggggctactaacaaaatatatacct
ggaaagccggaaacaaatactaaagcagcaaaactgcgatttatttttagccattcagct
ttaaaagaaggttgggataatcctaatgtatttcagattttgactattgctacaccgaaa
aatgatctaacaagaagacagaaaattggtcgtggattgcgtataccggttaatcaagaa
ggtaagcgagtttataacgaaaatcaaaatatagttactatatatgctaatgagactttt
gaagaattcgctgctggacttcaaaatgaatatttagaggatggattactttcaaacaga
attgatgaagacttttttacgaatatggttgtctctaagagtgtaactaatacagaagat
gtattgactaataaaaaagaagaaaaagaaattgaaaatgtaaatgaagaaaagtcgaca
actgataaaacaagaaaagtaactcatcatgaatcagttacttttgcaaatgtgttaaaa
caaaataatataattaacaataatagtaaaccaacagcccgaggattaaattcattgagc
aataatactattaaaaagaaaatagtagatcaaagtgttagtgagggtattgaggctgca
accgcgaaaagaatgatgagtatagtctttgatcgttttaatgttcctaaacctagagat
agacgagaccgtacgacagttcaactcattgataaaaataatagttattttaatgcactt
tggaataaaatttcttataaagttagatatcatatcaaatttaatgaagatgaattgatt
aatgctattgtaaatggaaataatcctttaaaggatattaaaataactagaatgacggcg
gttcaaacaagagctagagtagatttgaatactactaatgtaaaagatagagttattagt
cagaatactgaacatctaacatggaatgatatgcctattatggatgtaactagacaactt
gcagataaaacaggtttaactagaaaagctattataaaaatgattttgttaactaagaaa
aaagatagtagctttattaagaaaataaagatgaacccagctttgtttgttaacagagca
tatcaaaggattcggatgcatgagcaaaatcttttgagtcattctttagtttatattcaa
acaggtgaaaaatggtctaaggatttatttaagccatttgatgcatcggataatactttg
tggaaagtacctgaacgaggattaaagaaaactttatttgataaaattccaactcaatct
caagaagaaagaaaatttgcggaatcattagtaaacgaagagaaaataaagtatttcttt
aaattgccaaattggtttaagataccaactccatttggtaattacaatcctgattgggct
attcttgcagaaacaaatgggatagagaaactttattttgttatagacacgaagactaca
gaagagaaaggtactttaagaagtggtgagcagactaaattaaatgcaggtgctcaggct
tataaagcagaagggtttgaggatgtgagatttgaagctcctattaaggtgattggagat
ttagatttgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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