KEGG   Lactobacillus helveticus DPC 4571: lhv_1273
Entry
lhv_1273          CDS       T00625                                 
Name
(GenBank) ATP-dependent exonuclease subunit A
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
lhe  Lactobacillus helveticus DPC 4571
Brite
KEGG Orthology (KO) [BR:lhe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lhe03400]
    lhv_1273
Enzymes [BR:lhe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     lhv_1273
DNA repair and recombination proteins [BR:lhe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     lhv_1273
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 Viral_helicase1 DEAD AAA_30 AAA_16 ResIII DUF6471 Mg_chelatase
Other DBs
NCBI-ProteinID: ABX27287
UniProt: A8YVK0
Position
complement(1253973..1257587)
AA seq 1204 aa
MPQFTKEQEKAINDRGHDILVSASAGSGKTTVLVERVLKEILAGTQVDELLVVTFTKAAA
EEMKTRIKAALTKEMAKPGVDYRYLREQLNQIDTANISTIDAFCLDVIHRFYYSIELDPS
FTILTDDTQATLLKERALREIEGEMLTSKDKAFRHFYDNFAGDRDADSPRDLLLDLYNFA
MAKPEYKKWLAQLPQIYEIEDSVIGSKIWQKQIKPYIATKFSKLQEKIASYLTQAIMETK
ELAKVKESFTLFAQNLNNFVQAVKEDDDYDKQRELLRSCVFTINFRKSKKWDEDLLEFYN
EIQSLKDEAKSQVFDTFTSFYAVTEKEQIKIMQESQKIVTAISTAEIKLIERFNQLKRNE
NLLDYSDMEQLAYQILSQDTSSSQMARDFYQNKFKEILIDEYQDINALQERIIQQIKSEK
KNTLFMVGDVKQSIYGFRQAEPSLFLQKYHQFAEDENEHEERILLSDNFRSTEPVTQTVN
AVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSENEIDFSEI
QMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVT
DAENYFQTFELTVMMNYLKIIDNPDQDIPLVTVLRSPLFNFDEKELAKIRIKSKNSNFYS
ALTSYVGTNDVLSKKCKNFLNQLAELRSFATTHRISELIWSIYERTNLLEIMTALPNGEQ
RRVNLEALYERATSYESAGFKGLYQFINFIDRMRRSQKDLAQPLLTKEAGNAVRLMTIHG
SKGLEFPIVFYVGMQHHYQMRDLNGNYIINSDSMGITLREQNYRVDSLVKAMGNITKKQQ
LLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSF
IGPSLRFDRHVAIKLNDITKSIDQSQKILFIDYQDEDTKFIKKDEDTDNQNENTRKSALL
TQTVNKLYQFNYPFRDASETTAYQAVSEIKKAFNDPIDAELENSHLLTSTNRYLQPIDTK
PNFLYQTKFTGAEIGTATHLILQYYDYTNDSADNLDQEIATLIEQKKLNPDIVSSLNKDQ
IDWFVHGDFAKDFWKEPTNLKREVDFSSLLSARTLFKDFSDPDAKILVHGTIDGYFVAKN
GIILFDYKTDHVNKTNIDKSIELIKEKYTGQLRLYEQALNEFSEKKVIGKYLILLDAKQV
VEVK
NT seq 3615 nt   +upstreamnt  +downstreamnt
ttgccacaatttacaaaagaacaagaaaaagcaattaatgatcgaggtcatgatatttta
gtttccgcatcagcaggtagtggtaaaacaaccgtcttagttgaacgcgttttaaaggaa
attttagcaggtactcaagtagatgagttgttggttgtaacttttactaaggcagctgct
gaagaaatgaagaccagaattaaagcagcgttgactaaagaaatggctaaacctggtgtt
gattatagatatttacgtgaacagttaaatcaaatagatactgctaatatttccactatt
gatgcgttttgtttggatgtgattcatcggttttattattcaatcgaattggatcctagt
ttcactatcttaactgatgatacgcaggcaactttattaaaagagcgagctttacgagaa
attgaaggagaaatgttaacgagcaaggataaggcttttagacatttctatgataatttt
gctggtgatcgggatgcagatagtccacgtgatttattactggatttatataattttgct
atggcgaagccagaatataaaaaatggcttgcacagcttccacagatttatgaaattgag
gatagcgtaataggatcaaagatctggcaaaagcaaattaagccatatatagcaactaag
ttttcaaaattgcaggagaagatagcttcgtatttaacgcaagctataatggaaactaag
gaattagctaaagtaaaagaatcatttactttgtttgcacaaaacctaaataattttgta
caggcggttaaggaagatgatgattatgataaacaacgagagctattgagaagctgcgtt
tttacgattaattttcgtaaatctaaaaaatgggatgaagatcttctagagttttataat
gaaatccagtctttaaaagatgaggctaagagtcaagtatttgatacattcacttcattt
tatgctgtaactgaaaaagagcagataaaaatcatgcaggaaagccaaaagatagtaact
gctatttcaactgcagaaataaaactgattgaacgttttaatcaattgaagcgtaatgaa
aatttgcttgattatagcgatatggagcaattagcttatcagattttaagtcaagataca
tccagttctcaaatggcacgtgatttttatcaaaataaatttaaagaaattttgattgat
gagtatcaggatattaatgctttgcaggaaagaattatccagcaaattaagagtgaaaag
aagaatactctttttatggtgggggatgtaaagcagtcaatttatggttttaggcaagct
gagcctagtttatttttgcaaaagtatcatcaatttgcggaagatgagaatgagcatgaa
gaacggattttgttgtcagacaatttccgttctacagagccggtgacccaaacagttaac
gctgtgtttaaaagtattttaagtactgattttggtgggattgattatcaaaaagaaggg
cagctaatttttggagcaaaatattatcctaaatcattgcctcaagcaagtgaagttatt
gttcatgaaaagaagaataacaatgaaaaaagcgagaatgaaatagacttctctgaaatt
caaatggtactcgctcgcattaagcagttagaagacgagcatgttcaaatttttgatagt
aatactgggaaaatgcgtgatatggaatatagtgatattgctattttgaccagaagtcgc
agtgataacttggaaattatgcaagaatttgctaaacaagatattccattgtttgttacc
gatgcagaaaattactttcaaacttttgaattaaccgtcatgatgaactatttaaagatt
atcgataatcccgatcaggatattccattagtaacggtattgcggtcaccactatttaat
tttgatgaaaaagaattagctaaaattagaattaaaagcaaaaatagcaatttttatagt
gcacttacatcatatgtaggtacaaatgatgtattaagcaaaaagtgcaaaaactttttg
aatcaattggcagaattgcgtagttttgctacaactcatagaatttctgaattgatttgg
agtatatatgaacggactaatttattagagataatgacggctttacctaatggtgagcag
cggcgagtcaatctagaagcattgtatgaaagagccacttcatatgaaagtgcgggcttt
aaagggctataccaattcattaactttattgatcgaatgagacgtagtcaaaaggattta
gcacaaccgctgttaactaaagaagctggtaatgctgttagattgatgactattcatggt
tctaaaggactggaatttccaattgtcttctatgtcgggatgcagcatcattatcagatg
cgtgatctaaatggaaactatattattaattctgatagtatggggatcaccttaagagaa
caaaattatcgtgttgactcactagttaaagcaatgggcaatattactaaaaaacaacaa
ttgcttgaagaagaagcacgtattctgtatgttgccttaactagagcaaagcaaaagctg
attctggtaggggatgtccctagctttaataaaaaagttaaagaatggtcgacagaatta
aatcatgctggacaactgcctttgatcaataaattgtcagctactagtcctttgagtttt
atcggaccttcattaagatttgatcgtcatgtagcgattaagttaaacgatattactaaa
tcaattgaccaaagccaaaagattttgtttattgattatcaagatgaagatactaaattt
atcaaaaaagacgaagatactgataatcaaaatgaaaatacaagaaaatcagctttgtta
acgcaaacggttaataagctatatcaatttaattatccttttagggatgcaagtgaaacc
acggcttatcaggcggtttctgaaataaaaaaagcgtttaatgatccaatagatgcagaa
ttagagaactctcatttattaacttctactaatcgttatttgcagcctattgatactaag
cctaatttcttgtatcaaactaaatttacgggagcagagattggtacagctactcacctg
atcctgcaatattatgattacactaatgatagtgcagataatttagatcaagagatagca
acgttgattgaacaaaagaaattaaatccagatattgtttcaagtctgaataaagatcaa
attgactggtttgttcatggtgattttgcaaaagatttttggaaagagccaactaattta
aaacgagaagtagatttctctagtttgttatcagctagaactttatttaaagatttcagc
gatcctgatgcaaaaattttggttcacggtacgattgatggttattttgtagcaaagaat
ggtatcattttgtttgattacaaaactgatcatgtaaataaaacaaatatagataaatct
attgaattgattaaagaaaaatatactggtcagcttcgcttgtatgaacaagcattaaat
gaatttagtgaaaagaaagttattggtaaatatttaattctgcttgatgccaaacaagta
gttgaagttaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (12)   
   Pfam (12)   
All databases (22)   

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