KEGG   Companilactobacillus heilongjiangensis: JP39_05375
Entry
JP39_05375        CDS       T04057                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
lhi  Companilactobacillus heilongjiangensis
Pathway
lhi03030  DNA replication
lhi03430  Mismatch repair
lhi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lhi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JP39_05375 (dnaE)
   03430 Mismatch repair
    JP39_05375 (dnaE)
   03440 Homologous recombination
    JP39_05375 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lhi03032]
    JP39_05375 (dnaE)
   03400 DNA repair and recombination proteins [BR:lhi03400]
    JP39_05375 (dnaE)
Enzymes [BR:lhi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JP39_05375 (dnaE)
DNA replication proteins [BR:lhi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JP39_05375 (dnaE)
DNA repair and recombination proteins [BR:lhi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JP39_05375 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 HHH_3
Other DBs
NCBI-ProteinID: ALB30150
UniProt: A0A0K2LFV1
Position
1170118..1173420
AA seq 1100 aa
MSSFSLLHSPAKLTELIDQAKARGYQAIALTDINNLYGSLDFYKYAKKIGIKPIIGLTIE
AAGIIDTENTYPLLLLAKNEVGYQHLIKISSKVMSEKDPVNVADLKEYLSDLFVITPASE
AEVLNVDVEAYTSQLKPLTDEGSLYLGVSLYSGQIDNVKNIRSVARSQHLPMVALGDVRY
VNQDDHLAYQVVNDLRTGQRFESLSQVVEEGDHYLRTADEFANDFSEVDMSEAIANTSAI
AEQCNVDIEFKATELPKFATPTGTSSQQFLHELSTKGLKKRLRNQIPAEYQKRLDYELSV
IEKMGFSDYFLIVWDVIKHAHEIGIKTGPGRGSAAGSLVSYCLGITQVDPIKYDLLFERF
LNPQRANMPDIDLDLPDDRRDEMVMYMHDQYGSDHMAQIITFGTLAAKMALRDIARTFSQ
TQFQISQWSNAIPRKLNISLKESFDESSTLRNLVENSRENQLIFKVAQRIEGIPRHYSTH
AAGIVLSKKPMTDIVAVQLEDDGINLTQQTKYNVENVGLLKMDFLGLKNLTILDRAIQAI
SKRYGKEFIPERIPLNDQKTLQLFQRGATDGVFQFESDGIRSVLRRLVPTSFDDIVATNA
LYRPGPMENISTFIDRKHGREPVTYPDKSLERILKPTYGVLVYQEQVMQASSEMANFSLA
DADILRRAISKKNEQLIEENRQKFIDGAVGQGHDRGSAEKVYEYIEKFGNYGFNKSHSVA
YSMIAFWLAYMKVHFPDIFFACLLNSNLNNESKVTTYIQDAKDSHVKILNVDINRSQYEY
TDDDQAIRFGLLSIKGMRRDLASNIVEEREKNGPYTSPLNFLQRIDRRFVKTDYLEPMIL
SGTFDGFNRNRKELLYDFRDLIESIQLAGSNLSLFDVLDPKKHQVDDYTLTERLNQEKEY
LGVYVSGHPVEKYRSRLLDMRTVKLADLGNHQNQTVNVLGLVKNLRVIRTKKGQRMCFMT
IEDESGSMSVTIFPKLFQKIEEMTLDGKIFLFVGHPNVGKRGDLELIADRLSDPKQYTIQ
LPSEKLYLKVPKNLDTPENMEELYRIIESSRGKMPIIIYRELKKQAAILQSNHWINFTDQ
IQQKLEILLGKKNVLLKKND
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgagtagttttagtttactgcatagtcccgcaaaattgaccgagttgatcgaccaggcc
aaagctcggggttatcaggcgatagctctcacagatattaataatctctatggttcattg
gacttttataaatatgctaaaaaaattggtattaaaccaattatcggtttaacaattgaa
gcagctggaattattgatactgagaatacttatccattattattactagcaaaaaatgag
gttggttatcagcatcttataaaaatttcttctaaagttatgtcggaaaaagatcctgtt
aatgttgcggacttgaaagaatacttatctgatctctttgttatcaccccagcaagtgaa
gccgaggtgcttaatgttgatgttgaagcctatactagccaattaaagcctttgacagat
gagggttcgctctatttaggcgttagtctttattcaggtcaaatcgataatgttaaaaat
attcgttcagttgcccgttctcagcatttaccaatggtagctctcggtgatgttcgctac
gtcaaccaagatgatcacctagcttatcaagtagtcaatgatctccgcactggtcagcgt
tttgaaagtttgagccaagtcgttgaagaaggagatcattatttacggacagccgatgaa
tttgccaatgatttttcagaggtcgatatgtcggaggcaattgctaacacaagtgcgatt
gctgaacagtgtaatgtcgatattgaatttaaagcgactgaattgcccaagtttgcaaca
ccgacaggcaccagttcacaacaatttctccatgaactttcgactaaaggtttaaagaag
cgtttgaggaatcaaattccagctgagtatcaaaaacgtttggattacgaattgagtgtt
attgaaaaaatgggcttctcagactactttttgattgtttgggatgttatcaagcatgct
catgaaattggcattaaaacgggtcctggacgtggttctgcagctggttccttggtgtca
tactgtttgggaatcacccaagtggatccaatcaagtatgatttactatttgaacgattc
ttgaacccacaacgtgccaatatgccggatattgatttggatttaccagatgatcgacgt
gatgaaatggttatgtacatgcatgatcagtatggttctgaccacatggcacaaattatt
actttcggaacattggctgccaagatggctttgcgtgatattgcacgaacatttagtcag
acacaatttcaaatctcacaatggtcgaatgctattcccagaaaacttaatatttctttg
aaagaatcgttcgatgagtcgagtactttacgtaatttagtagagaactcacgtgagaac
caattgatttttaaagtggctcaacgaattgaaggtattccacggcattattcaacccat
gcggccggaattgtcctcagtaaaaagccgatgaccgatattgttgcagtgcaattggag
gatgacggtatcaacctgacacaacagacaaaatataatgttgaaaatgtcggattgctg
aaaatggattttctgggattgaagaatttaacaattttggatcgagccattcaagctatt
tctaaacgttacggtaaggagtttattccggaaagaattccgttgaatgatcaaaaaacc
ttgcagctattccaaagaggggcaactgacggggtgttccaatttgaatcggatgggatt
cgtagtgtcttgagacgcctagttcccacgagtttcgacgatattgtggctaccaatgcc
ttgtaccgtccaggtccaatggaaaatatttcgacatttattgacagaaaacatggtcgt
gaacctgtaacgtaccctgataagtcactggagcggattctgaagccaacatatggggtt
ctagtgtatcaggagcaagttatgcaggcgtcgtctgaaatggctaatttctcgcttgct
gatgccgatattttacgtcgtgctatcagtaaaaagaatgaacagttgatcgaagagaat
cgtcaaaagtttatcgatggtgcagttggacagggacatgaccgtggttcagctgaaaaa
gtttatgaatatattgaaaagtttggtaattatggatttaacaagtctcactcagttgcc
tattcgatgattgccttttggttggcatacatgaaagtccattttcctgatattttcttt
gcttgtcttttgaattccaatttgaataatgagagtaaagtaacgacttatattcaggat
gccaaggattcacatgtgaagatacttaatgtcgatattaatcgaagtcagtacgaatat
actgatgacgatcaagcaattcgttttggattgttgagtatcaaagggatgcgccgtgat
ttggcaagtaatattgttgaagaacgtgagaaaaacggtccttacacgagtcctttaaac
tttttgcaacggattgaccgtcgttttgttaaaaccgattacttggaaccgatgattttg
tcaggtacatttgatggctttaaccgtaatcgtaaggaactgttgtatgatttccgcgat
ttaattgagagcattcagttggctggcagtaatttgtcattgttcgatgtattggatcca
aagaagcatcaggtggacgattatacgttaaccgagcgactgaatcaggaaaaggaatat
ttgggtgtatatgtttctggtcatccggtggaaaagtatcgcagccgtttgttggatatg
cgcacagttaaattggctgatctgggcaatcatcagaatcaaacggttaatgtactcgga
ttggtcaagaatttgcgcgtgattcggactaaaaaaggtcaacgaatgtgctttatgacg
attgaagacgaatcaggcagcatgtcagtgacaattttccctaagttattccaaaaaatt
gaagaaatgactctcgatggaaagatattcctatttgttggtcatccaaatgttggtaaa
cgtggtgatttggaattgattgcggaccgtctgtctgatccaaaacaatatacgattcaa
ttgccaagtgaaaagttgtatctgaaagtacctaaaaatttggatacgcctgaaaatatg
gaagagctgtatcgaatcattgaaagttctcgtggaaaaatgccgataattatttatcga
gaactaaagaagcaagctgcaattttgcagtcgaatcattggatcaattttaccgaccaa
attcaacagaaattggaaatacttctgggtaaaaagaacgttttgctaaaaaaaaatgat
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system