KEGG   Laribacter hongkongensis: LHK_02627
Entry
LHK_02627         CDS       T00884                                 
Name
(GenBank) UvrABC system protein C
  KO
K03703  excinuclease ABC subunit C
Organism
lhk  Laribacter hongkongensis
Pathway
lhk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lhk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LHK_02627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lhk03400]
    LHK_02627
DNA repair and recombination proteins [BR:lhk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LHK_02627
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 UVR HHH HHH_2 DNA_processg_A
Other DBs
NCBI-ProteinID: ACO75608
UniProt: C1DCI9
Position
complement(2498151..2499971)
AA seq 606 aa
MPDTAPSSPFDYQTVLASLPALPGVYRMLDTEGQVLYVGKAVDLKRRVSQYFQKSDLSPR
IELMVRQIAAIETTVVRSEAEALVLENNLIKSLAPKYNILFRDDKSYPYLMLSRHAYPQL
AYYRGALDHQHQYFGPYPNGYAVREAIAILQRVFRLRTCEDSVFANRSRPCLLYQIKRCS
APCVGLVGEKDYAADVRRAAEFLSGRQHALTEDMTRDMLAASEALEFEKAAELRDQIQAL
ARVQERQFVMSTSSDIDCDVVGIAREGGLVCVNLVMIRGGSQLGDKRFFPDNADDLDDSG
VLEAFLLQHYSHQPAPGTVYVSTAVNPVMGEALSAIAERRVSVISHTLGERRIWVEMAEK
NARLSIQQKLASRSTQEMRIAALAEALGYDQVERLECFDISHTMGEATVASCVVYDHGQM
RPSEYRHFNISGITPGDDYAAMREALTRRYQKLAAGEGKLPDILLIDGGKGQVGVAVEVL
AELGLNELPIVGVAKGEARKPGLETLVLVREQKTLQLPADHPALHLIQTVRDEAHRFAIT
GHRARRAKARTTSTLEEIPGVGPKRRQRLLTRFGGLKGLAAASVEDIALVEGINRVLAEK
IYAALH
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgcccgataccgctccttcttcaccgttcgactaccagaccgtgctggccagtctgccg
gccttgcccggtgtctaccgcatgctggacaccgaaggacaggtgctctatgtcggcaag
gccgtcgacctgaaacgacgggtttcgcagtatttccagaagtccgacctgagtccgcgc
atcgaactgatggtgcggcagatcgctgccatagaaaccacggtggtgcgcagcgaggcc
gaggcgctggtgctggaaaacaacctgatcaagtcgctggcacccaagtacaacatcctg
tttcgtgacgacaaatcttatccttacctgatgctgtcacggcacgcttacccgcagctg
gcctattatcgcggtgcgctggaccaccagcaccagtacttcggtccgtacccgaacggc
tacgccgtgcgcgaggcgattgcgatcctgcaacgggtcttcaggctgcgcacctgtgag
gacagcgtgttcgccaaccgctcgcgtccatgcctgctgtaccagatcaagcgctgttcg
gcgccctgcgtcggtctggtcggcgaaaaggactatgccgccgatgtgcggcgggcagcg
gaattcctgtccggccggcagcatgcgctgaccgaggacatgacccgggacatgctggca
gccagcgaagcactggagttcgagaaagcggccgaactgcgcgaccagatccaggcgctg
gcccgggtgcaggaacgacagttcgtcatgagcacgtccagcgacattgactgtgacgtg
gtggggattgcgcgggaaggcgggctggtatgcgtcaacctggtgatgatccgcggcggc
agccagctgggcgacaagcgctttttccccgacaacgccgacgatctggacgacagtggc
gtgctggaggcgttcctgttgcaacattacagccatcagccggctccgggaactgtttat
gtcagtacggcggtcaacccggtaatgggtgaggcactgtcggccattgccgagcggcgg
gtcagcgtgatcagccacacgttgggcgagcggcggatctgggtggaaatggccgagaaa
aacgcacgcctgtcgatccagcagaagctggccagccgcagtacccaggaaatgcggatt
gccgcgctggccgaggcattgggctacgaccaggtcgagcggctggagtgttttgacatc
agtcacaccatgggcgaggcaacggttgccagttgcgtggtgtatgaccacgggcagatg
cgtccgtcggagtaccgtcacttcaacatcagcggcatcacgcccggcgatgattacgcc
gccatgcgcgaggcactcacccgccgttaccagaagctggccgctggagaaggcaagcta
ccggacatattgctgatcgacggcggcaaaggacaggtgggtgtggcggtggaagtgctg
gcagagctgggcctgaacgaattgcccatcgtcggcgtggccaagggcgaggcgcgcaag
cccggacttgagacactcgtcttggtgcgcgagcaaaagacgctacaattgccggcggat
cacccggctttgcatttgatccagactgtccgcgacgaagcgcaccgctttgccattacc
ggccaccgggcccgacgggccaaggcccgtaccacttcgacgctggaagaaatccccggt
gtcggtcccaagcggcggcaaaggctcctgacccgttttggcgggctcaagggactggcg
gcagccagtgtcgaggacattgcgctggtcgaaggcatcaaccgggtgctggctgaaaaa
atctacgctgccctgcattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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