KEGG   Lactobacillus helveticus H10: LBHH_0303
Entry
LBHH_0303         CDS       T01959                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lhl  Lactobacillus helveticus H10
Pathway
lhl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lhl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LBHH_0303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lhl03021]
    LBHH_0303
   03400 DNA repair and recombination proteins [BR:lhl03400]
    LBHH_0303
Enzymes [BR:lhl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LBHH_0303
Transcription machinery [BR:lhl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LBHH_0303
DNA repair and recombination proteins [BR:lhl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LBHH_0303
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2
Other DBs
NCBI-ProteinID: ADX69535
UniProt: F0NV41
Position
319152..320090
AA seq 312 aa
MIEFEKPNITVVEQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDGVL
HEFSTVPGVREDVTKIILNLKKLELKSLSDERKVIELDFEGPATVTADDLKVDADVQVLN
PDQYICTIAEGGHLHMEIAVQNGRGYVAASDNKSDDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDKLTFEIWTDGSIKPNDALSFAAKILVEHFKVFESADADTKFSEVMVEKED
DKKEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDMTESDMMRVRNLGRKSLEEVKNK
LTDLGLSLRQED
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgaatttgaaaaaccaaatattaccgttgttgaacaagaagattcttacggtaag
tttgttgttgaaccacttgagcgaggctttggtactactttaggtaactctttaagaaga
gtcttacttacttctattcctggtactggacttgtttatgtgcaaattgatggcgtttta
cacgagttctcaacagttcctggcgtcagagaagatgtaaccaagattattcttaatttg
aagaagcttgaattaaagtctctttcagatgaaagaaaggttattgaattggactttgaa
ggtcctgccacagtaactgctgatgatcttaaagttgatgcagacgttcaagtcttaaat
ccggatcaatacatttgtaccattgctgaaggtggacacttgcacatggaaatcgccgta
caaaatggtagaggttatgttgctgcaagtgacaataagagtgatgacatgccaattgga
gtaattcctgttgattctctattctcaccaattaaaaaggttaactaccaagttgaatca
actcgtgttggtaagagagacgattttgacaagctcacttttgagatttggactgacggt
tcaatcaagcctaatgacgcccttagttttgctgctaagattttagttgaacatttcaaa
gtatttgaatcagctgatgcagatactaaattcagcgaagtaatggtggaaaaggaagac
gacaagaaagaaaagaaactcgaaatgacaattgaagagcttgatctttctgttcgttca
tacaactgcctgaaacgtgccggcattaacactcttcaagagttaactgatatgacagag
tcagatatgatgcgtgtacgtaacttgggacgtaaatcattggaagaagttaagaataaa
ttaaccgacttaggtctttcacttcgtcaggaagactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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