KEGG   Lactobacillus helveticus H10: LBHH_1279
Entry
LBHH_1279         CDS       T01959                                 
Name
(GenBank) Exodeoxyribonuclease V alpha chain
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
lhl  Lactobacillus helveticus H10
Pathway
lhl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lhl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LBHH_1279
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lhl03400]
    LBHH_1279
Enzymes [BR:lhl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     LBHH_1279
DNA repair and recombination proteins [BR:lhl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LBHH_1279
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 AAA_11 Viral_helicase1 HHH_5 AAA_5 AAA_22 UvrD_C AAA nSTAND3 RsgA_GTPase UvrD-helicase AAA_23 SLFN-g3_helicase AAA_12 DEAD T2SSE AAA_28 NTPase_1 AAA_29 IMS_HHH CemA AAA_16
Other DBs
NCBI-ProteinID: ADX70473
UniProt: F0NU21
Position
complement(1346425..1348776)
AA seq 783 aa
MSEFTGKINGIVFENDKDLYKILDVEIIGSLENYSRSEIKVTGNFGDVQIGSSYHFDGKL
IMHEKFGLQFRANSYKPIMPHEEGSLTNYLSSNKFPGIGKKTAGTIIEELGLNALDILKE
NPAKIDTLSLTKKQKDSLLSGLNSMDSYSEIVLKLAQYGIRKQVAARLYQCYHGAALDKL
KEDPYAAINEVTGYGFKTADTLGKQLDIKNDDPRRINGAIYQILLDALSGEGDTYVSLSE
LLTAAKDLLQISEFDPIAICVNSLQKKGKIVVDGENAFLQNIYQTEVDIARSMKSLVESR
KLQEDKQYSDKKIEEAIKDAEQELKIEYDDTQKLAIKNALNNPISILTGGPGTGKTTIIN
GILLALRKLAEIPASSLYSEDPPFLLAAPTGRAAKRMGEITGISAKTIHRLLGLGIGDAN
AEDLNELNGEILIIDEMSMVDMFLFKQLLSSINQTRHIVFVGDKDQLPSVGAGNVFSDLI
KSHAFPTTVLKQIHRQGDESTIITLAHDVNEGKDQQALFKKTKNYSFISCRPELVGDAVG
QIVKLALKRGFDKDDVQVLSAMYHGSGGVNNLNDVIQEIMNPPKAKSKFLEVRNEVFRIG
DRILQLQNNPEKDIYNGQIGKIISIDEDNSKECMVANFDGREVSFGKKDLTDLTRAYAIT
IHKSQGSEFPLVILNLTMQNYVMLKRNLLYTAITRAEKNLVLVGDPRAFAAAFNTPGNDR
KTGLAEKICAQLGIKDVKADENTKEEVVESKPQKQEPQDYILTPEKIYSGEIDPMIGMEN
IKL
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgagtgaattcaccggtaaaattaacgggattgtttttgaaaacgataaagatttatac
aaaatcctcgatgttgaaatcattggttcactcgaaaattattcacgtagcgaaattaag
gtaacaggaaattttggtgacgtgcaaattggaagtagctatcattttgatggcaaactg
attatgcacgaaaaatttggtttgcaatttcgtgctaatagttataaaccgatcatgcct
catgaagaaggttcacttactaattatttaagttctaataaatttccaggtattggtaaa
aaaacggcaggtaccattattgaagaattaggattaaatgctttagacattttaaaagaa
aatcctgccaaaatcgacaccttatctttaaccaaaaaacaaaaagatagtttattgtca
ggccttaattctatggattcttattccgaaattgttttaaaattggcacaatatgggatc
aggaaacaagtagccgctagactttatcaatgttatcatggtgcagctttagataaatta
aaagaggatccatatgctgctattaatgaagttacaggttatggctttaagactgcagat
accttgggcaaacaattagatattaaaaatgatgatccacgaagaataaatggtgccatt
tatcagattcttttggatgctttaagcggtgagggagatacatatgtctcactatccgag
ctgttaactgctgccaaagatttattacaaatttcagagtttgatccgattgctatttgt
gtaaattctttacagaaaaaaggaaaaatagtagttgatggtgaaaatgcctttttgcaa
aatatttatcaaacagaagtagatattgctcgatctatgaaaagcttggtagagagcaga
aaactgcaagaagataagcagtatagcgacaaaaaaattgaagaagccattaaagatgcg
gaacaagagttaaagattgaatacgatgatacacagaaattagcaattaaaaatgctttg
aacaatcctatttcaattttgacgggtggtcctggtacaggaaaaactacgattattaat
ggaatattactggcattaaggaaattagcagaaatcccagcttcatcgctatatagtgaa
gatccaccatttttattagcggcgccaacaggtagagctgcaaagagaatgggtgagata
actggcattagtgctaaaaccatccaccgtcttttaggattggggattggagacgcaaat
gccgaggatttgaatgaactcaatggtgaaatcttaatcattgatgagatgtcgatggtt
gacatgttcctatttaagcagcttctctctagtatcaatcaaactcgacacattgtgttt
gtgggggataaggatcagttgccttctgttggtgcaggaaatgtatttagcgatttaatt
aagtcacatgcttttcctactacggtattaaagcagattcaccgacaaggtgatgaatca
acgattattacattggctcatgatgtaaatgagggcaaagatcaacaagctttattcaaa
aagactaagaattattcatttattagctgtagacctgaattggtaggggatgcagtaggt
caaattgtaaaattggctttaaaacgtggcttcgataaagacgatgtacaagtattaagt
gcaatgtatcatggtagcggcggggtaaataatttgaatgatgttattcaagaaataatg
aatccacccaaagccaaaagtaaattcttagaagtgcgtaatgaagtctttcggattggc
gatcgaattttacaattacaaaataatcctgagaaagatatctataatggtcaaatcggt
aagataattagtatcgatgaagataattctaaggaatgcatggttgctaattttgacggt
cgggaagtaagttttggcaaaaaagatttaacagacttgaccagggcgtatgcgattact
attcataagtcacagggctcggaatttccgttagtaattttgaatttgactatgcaaaat
tatgtgatgcttaaacgaaacttgctttatacggcgattactcgtgctgagaaaaattta
gttttagtaggagatccgcgagcttttgcggcagcttttaatacaccaggaaatgatcga
aaaactggattggcagaaaaaatctgtgctcaattgggtattaaagatgttaaggctgat
gagaacacgaaagaagaggtagttgaatcaaagcctcaaaaacaagaaccacaagattat
atcttaacgcctgagaaaatttattcaggtgagatcgatccaatgattggaatggaaaat
attaaactataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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