KEGG   Lactobacillus helveticus R0052: R0052_03090
Entry
R0052_03090       CDS       T02217                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
lhr  Lactobacillus helveticus R0052
Brite
KEGG Orthology (KO) [BR:lhr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lhr03009]
    R0052_03090
Enzymes [BR:lhr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     R0052_03090
Ribosome biogenesis [BR:lhr03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    R0052_03090
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AFR21575
Position
complement(533612..534469)
AA seq 285 aa
MVYHFTLFYPKNLEPLPVNDVLCKLLIPRKWRHYLRIEQNITINGTYRYFNQNVLPGNKI
DIILDQVDSAQQKYPASGKLPDIIYEDDNLLIINKKKGQKTHPNLNETNTALNDCATYLG
QSPYIVHRLDMLTGGLLLVAKNPAVVPILNRELTSKTFHRNYLAKVDHADKLSDQGTINQ
SIDHDPEDQRKRMISPAGLHAVTHYQVLKRNDNNTAVVKLTLETGRTHQIRVHLASLGTP
IIGDPLYNPNFGGEDLTLDAYEISLIKPFSFEKLTVKLPEEEIKL
NT seq 858 nt   +upstreamnt  +downstreamnt
atggtttatcattttacacttttttatcctaaaaatctcgagcccttacctgtaaatgac
gtattatgcaaattgcttattccgagaaaatggcgtcattacttaagaattgaacaaaat
attacaattaacggcacatatcgctattttaatcaaaatgttttgccaggcaataaaatt
gacattatattagatcaggttgactctgctcagcaaaaatatccagctagtggaaaattg
cctgatatcatttatgaagacgataatcttttaatcattaacaaaaagaaggggcaaaaa
actcaccccaacttaaatgaaaccaataccgccttaaatgattgcgccacctatttagga
caaagtccttacattgttcatcgattggacatgcttactggcggcttactgcttgtcgca
aaaaatcctgcagtagtgccgattttaaatcgtgaacttaccagtaaaaccttccatcgc
aattatttggctaaagttgaccatgcagataaattaagcgatcaaggaacaattaatcag
tcaattgatcatgatcctgaagatcaacgaaaaagaatgatctcacctgctggacttcat
gccgtaacacattatcaagtgttaaaaagaaatgataataatacagcggtagttaaacta
actttggaaactggtcgtactcaccaaatccgtgtgcacctcgcatcccttggtacacca
attattggcgatccgttgtataatcccaactttggtggagaagacttgacactcgacgct
tatgagatttcattgattaaacctttttcttttgaaaaattaacagttaaattaccagaa
gaagaaattaaattataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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