KEGG   Lactobacillus helveticus R0052: R0052_06820
Entry
R0052_06820       CDS       T02217                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
lhr  Lactobacillus helveticus R0052
Brite
KEGG Orthology (KO) [BR:lhr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lhr03016]
    R0052_06820
Enzymes [BR:lhr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     R0052_06820
Transfer RNA biogenesis [BR:lhr03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    R0052_06820
 Prokaryotic type
    R0052_06820
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4
Other DBs
NCBI-ProteinID: AFR22173
Position
complement(1187881..1188819)
AA seq 312 aa
MELQFLGTGAGQPSKQRNVSSVALKLLDELNEIWLFDVGEATQHQILRTNIRLRKVTKIF
ISHNHGDHIFGLPGLLSTRSFQGDVGPLTIYGPPGIEQFVKVSLKVSRTKVSYPIKFVEL
TKPGLICEDKGFRVYTDRLDHRIPSFGFRVVEDSHPGELLIDKLAKYNIPNGPLLGQLKR
GEQVTLADGTVLNGKDFLGAEKPGRIVTIIYDTRSTPSIARLAKDADVLVHESTFAGDEA
KMAHNYYHSTSVQAAKIAKQENVKKLCLSHISARYMGNKAKKLESQAKKVFPNTILVNDF
DQINIPMKGSEK
NT seq 939 nt   +upstreamnt  +downstreamnt
atggaattacaatttttaggcacgggagcaggacagccttccaaacagcgtaatgtttca
agtgtcgcgcttaagttactagatgaactaaatgaaatttggctatttgatgtcggagaa
gctacacagcaccaaattctgagaacaaatattagattgcgaaaagttactaaaattttt
atttcacacaatcatggcgatcatatttttggcttgccgggacttctttcaactagatct
tttcaaggggatgtaggtccattaacaatttatggccctcctggtattgaacaatttgtc
aaagtttcattaaaagtatccagaactaaagtgtcatatccaattaaatttgtggaattg
actaagccaggtttgatttgtgaagacaagggctttcgcgtttatactgatcgattagac
catagaatacctagctttggatttagagtagttgaagattctcatcccggcgaactttta
attgataagttagcaaagtataatattcctaacggcccacttcttggtcaattaaaacga
ggtgagcaggttactttagctgatggaacagttttaaacggtaaagactttttaggtgct
gaaaagcctggcagaatcgtgactattatttatgatactcgctcaacaccaagcattgct
cgcttagccaaagatgcagatgttttggttcatgaatcaacttttgctggagatgaagct
aagatggcacataattattaccattcaacttctgttcaagcagctaaaattgctaagcag
gaaaatgttaaaaaattatgtttaagtcatatttctgctcgttatatgggaaataaagct
aagaaactcgaaagtcaagctaaaaaagttttccctaatacaatattagttaatgatttt
gatcaaattaatattccaatgaaaggttcagaaaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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