KEGG   Linepithema humile (Argentine ant): 105675761
Entry
105675761         CDS       T04898                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105675761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lhu03041]
    105675761
Spliceosome [BR:lhu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    105675761
 Complex B
    105675761
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc
Other DBs
NCBI-GeneID: 105675761
NCBI-ProteinID: XP_012228567
Position
Unknown
AA seq 938 aa
MADKAMMKQIAEQKLKAFSIGTMGKRPLSKKELEEQRKKEQEQAAAQAFEEFVATFQETP
SKTTSKVWVKAGTYDAGKRQEDTREKGKLYKPQSKISELVDNRSSAEQAQEYARLLGSNE
RKLDRLGKKKKEGEKKKSNLELFKEELKMIQEEREERHKYKGVVKTVISAQSEDPMMAAL
KCVEDGSFDNGDPNTTNLYLGNLNPKITEQQLMEIFGKFGPLASIKIMWPRSDEEKARQR
NCGFVAFMSRKDGERALKNLNGRDIMQYEMKLGWGKSVPIPPYPIYIPPALMEITQPPPP
SGLPFNAQPHRRDRHKIPRIRNLQSADPQEKENFEKVLQNAVVKVVIPTERNLVMLIHRM
VEFVIREGPMFEAMIMNRELNNPMFRFLFENYSPAHTYYRWKLYSILQGDGQKEWHIDDF
RMFKGGSVWRPPPINPWTQGMPDELIEMEERQEPRRGSLSNSQRDRLEDLLRNISPERIK
VAEAMVFCIEHAEAAEEICDCISESLSILQTPVNKKIARLYLISDILHNCGVKVTNATIY
RKAFETRLLDIFSEVHQAYKQFDSRLKAEGFKVRVMRMFRAWEDWTVYPRDFLVKLQNTF
LGLVLMDEPEPENDEDIDGAPLSDVDGDGTEDLDGIPLDGAALLKGAMKHGLTPQPTPNY
DDIDGVPMDEDIDGVPMDDDDSANMRKDDEKKSAMPAGFVPSRWETVDPDQVEAQAMTTS
KWEELGQNEDSNSQDTSMDSSGRDYNEERRNRLREIEVKIMQYQDELESGRRTLKSGMTI
QAQVEHYRKKLIRKSEREMKDIKSEERDDDKRREKKRSRSTTPESPTHSYRDRRRSSSPK
VARYRSRSRSPRSKRRSRSPYKKRVPVTPSPPRIRRTPSPSFSSNRGSRRSPVNERCDRK
RRRSPSLSPPPPPRTSSKHRACSPPSPSSRKHRHKHKY
NT seq 2817 nt   +upstreamnt  +downstreamnt
atggcggataaagctatgatgaagcaaattgccgagcaaaagctcaaggctttctccatt
ggcacaatgggcaagcggccgttaagtaaaaaagaattggaagagcaacgtaaaaaagaa
caggagcaagcggctgctcaagcatttgaagagtttgtggcaacatttcaagaaacacct
agtaaaacaactagcaaggtttgggtcaaggcagggacatatgatgcaggcaagagacag
gaggacacgagagagaaaggaaagctttataaaccgcaatcaaaaatctcggaattggtt
gacaacagatcatcagctgaacaggctcaagaatatgcaagattacttggatcgaatgaa
agaaaattagataggctaggcaaaaagaagaaagaaggtgaaaagaagaagagtaatctt
gaattgttcaaagaagaactgaaaatgatacaagaggaacgtgaagaaaggcataagtat
aagggtgtagtgaaaacagtaatatctgctcaatctgaagatccaatgatggctgcttta
aaatgcgtggaagatggctcgtttgataatggcgatccaaacaccacaaatttatatctg
ggaaatttgaatccaaaaatcacagaacagcaattgatggaaatatttggtaaatttggc
ccactagctagtataaaaataatgtggccgcgtagcgacgaagaaaaagctagacaaagg
aattgcggctttgttgcattcatgagtcgtaaagatggcgaacgtgcgttaaaaaatctg
aatggtcgcgacataatgcagtatgaaatgaagttgggctggggaaaaagtgtaccgatt
ccgccttatccaatttatattccgccggctttgatggagatcacgcagccaccgcctccg
tctggtcttccatttaacgctcaaccacatcgtcgcgacagacacaagataccacgtatt
cgcaacctccagagcgcggacccgcaggaaaaggaaaactttgaaaaggttttgcagaat
gctgttgtcaaagtggttataccaacagaaaggaatttagtcatgttaatacatagaatg
gtggaatttgtaatccgagaaggaccgatgttcgaagcgatgattatgaacagggaattg
aataatccaatgtttagatttctgtttgaaaattattctcctgcgcacacttattaccgc
tggaaactatactctattttacaaggggacgggcagaaggaatggcacatcgacgacttt
agaatgttcaaaggcggaagtgtgtggaggccaccgccaatcaatccgtggacgcagggc
atgccagacgaattaatagaaatggaagaaagacaagagcctagaaggggtagtctttcg
aacagtcagcgagatcgtttagaagatttattgcgaaacatatcacctgaaagaataaaa
gttgcggaagcaatggtattttgtatagaacatgccgaagcagcagaggagatttgtgat
tgtatttcagagtcattgtcaatactgcaaactcctgtgaataagaaaatagcaagatta
tacttgatatctgatatattgcacaactgtggagttaaagtgactaacgccactatttat
agaaaggcatttgagacacgtcttctggatattttcagcgaagttcatcaagcgtataaa
cagtttgacagtagactgaaggcggaaggattcaaagttcgtgttatgcgaatgttcaga
gcatgggaagattggactgtgtatccgagagactttctcgtcaaattacagaataccttc
ttggggctcgtcttgatggatgaacctgagccagagaacgatgaggatatcgacggcgcg
ccattgtccgatgtcgatggcgatggtactgaagatttggacggaatacccctcgatggt
gctgctttgctgaaaggtgccatgaagcatggcctcacgccacaaccgactccaaattat
gacgatatcgatggagtgcccatggatgaagacatcgatggagttccaatggacgacgac
gacagcgcaaacatgagaaaagacgatgagaaaaaatcggcaatgccagctggattcgtt
ccttcgcgatgggaaactgttgatcctgatcaggtggaagcgcaagcgatgaccaccagc
aagtgggaagagttgggccaaaatgaagattccaattctcaagataccagtatggattcc
agcggcagggattacaacgaagaaagacgaaacagattgcgtgagattgaagtaaagatt
atgcagtaccaagatgaattggaaagtggcaggagaacgttgaagtctggtatgacgata
caagcacaagtggagcactatagaaagaagcttataagaaagagcgagagagaaatgaag
gatataaagagcgaagagcgagatgatgacaagcgaagggagaagaagcgaagtcgtagc
acgacgccggaatctccgactcacagctacagagatcgaagacgctcgtcaagcccaaaa
gttgcaagatatagatcgcgcagtaggtcgcctcggtccaaacgcaggtcaagatcaccg
tacaagaaacgtgtgccagtcactccatctcctcctcgcattcggcgcacgccatcgcct
tctttttcttcgaacagaggatcacgcagatcgcctgttaacgagcgttgtgacaggaaa
agacgtagatcaccctccttgtcgcccccgccgcctccacgtacttcctctaaacataga
gcctgtagtccgccttctccttcctcacgtaagcacagacacaagcataaatattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system