KEGG   Linepithema humile (Argentine ant): 105678031
Entry
105678031         CDS       T04898                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING1 isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
lhu  Linepithema humile (Argentine ant)
Pathway
lhu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lhu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    105678031
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lhu04121]
    105678031
   03036 Chromosome and associated proteins [BR:lhu03036]
    105678031
Enzymes [BR:lhu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105678031
Ubiquitin system [BR:lhu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    105678031
Chromosome and associated proteins [BR:lhu03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     105678031
    Noncanonical PRC1 (PRC1.1)
     105678031
    Noncanonical PRC1 (PRC1.3/1.5)
     105678031
    Noncanonical PRC1 (PRC1.6)
     105678031
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-Nse zf-RING_5 zf-RING_4 zf-RING_6 zf-rbx1 zf-UDP zf-C3HC4_5 TRAF3_RING Sina_RING SOG2
Other DBs
NCBI-GeneID: 105678031
NCBI-ProteinID: XP_012232427
Position
Unknown
AA seq 380 aa
MIKMASAEQVGLNKTWELSLYELHRTPQDAITDNTEIAVSPRSLHSELMCPICLDMLKKT
MTTKECLHRFCSDCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDLLISKIYPSRDEYE
AHQERVLAKLNKSHSQAALVNSITEGIKLQSQNRPQRSRKNANESENASNASYNNTPNVS
TSIPPNTSTVANQSDSSQSTTGPLNSGGTTSRNSTTPSPNPANQTLKPPKRQKSLQNSEN
DSSSAEAETGGGDSMVDTEGEGPSEPLMLDEIELVFKPHPTEMAGDNSLIKALKENSIRY
IKTTANATVDHLSKYLAMRLTLDLDTELSESDRLLNFCIYIAPSPGQLVVLSGSQTLRQV
NDKFWRVNRPLEMYYSWKKT
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgatcaagatggcatctgcggaacaggtcggccttaataaaacatgggaactgtctcta
tatgaattacatcgcactcctcaggatgcgattactgacaatacggagatcgcggttagt
ccacgaagtttgcatagtgaactgatgtgtcccatttgtttggatatgttgaaaaaaact
atgactactaaggaatgtttgcaccgtttttgctccgattgtattattacagctttacgg
agcggtaataaagagtgtcctacatgtagaaagaaattagtttccaaacgatctcttaga
ccagatccaaactttgatttattaatctcaaagatctatccaagcagagatgagtatgag
gctcatcaggaacgagtcttggctaaacttaataaatcacattcacaagctgcacttgtt
aactccattacagagggtattaagttacaaagtcagaatcgtccacagcgctccagaaaa
aatgctaatgaatctgaaaatgcaagtaacgcatcttataacaatacaccaaacgttagt
acatctattccaccaaatacatcgactgtagcaaatcaaagcgattcttctcaaagtaca
acaggacctttgaatagtggaggtaccacatctaggaattctactacgccatcgccaaac
cctgcaaatcaaactttgaaaccaccaaaacgacagaaaagtcttcaaaattcggagaat
gactcttctagtgctgaagcagagactggtggcggtgattctatggttgatacagaaggc
gaaggtcccagtgaacctttaatgcttgatgaaattgaactcgtttttaaaccacatcct
acagaaatggctggtgataattctttaattaaagcattgaaagaaaatagtattcgttac
ataaaaacgactgcaaatgctacagtggatcatttaagtaaatatttggcgatgcgttta
acactcgatctggatactgaattatcggaatcggataggttattaaatttctgcatttat
attgcaccttcacccggtcaacttgtagtgctaagcggctcacaaacattgcggcaagtg
aatgataagttttggcgtgttaatcgacctttggaaatgtattactcatggaagaagacc
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (17)   
   Pfam (17)   
All databases (32)   

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