KEGG   Leptospira interrogans serovar Copenhageni: LIC_12686
Entry
LIC_12686         CDS       T00166                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
lic  Leptospira interrogans serovar Copenhageni
Pathway
lic03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LIC_12686 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lic03400]
    LIC_12686 (recB)
Enzymes [BR:lic01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     LIC_12686 (recB)
DNA repair and recombination proteins [BR:lic03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LIC_12686 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 ResIII AAA_30 Tricorn_C1
Other DBs
NCBI-ProteinID: AAS71245
UniProt: Q72NZ1
Position
I:complement(3256875..3259976)
AA seq 1033 aa
MEASAGTGKTYTIMEIVIDLILEHKIPLTQILILTYTEKAAGELKERLRKKLISSGLTKE
ARELDQVTISTIHGFCNAILKEYPVETETHTNWILTDALERLNIALYKLQHEEWNSWVDP
EKLEDFILSSKYRFKKENILISASKLLSGKKYEYSNETTTMTSETFLQKTALIIADMVLK
EFKTSEWMSYDQMILKTRDSLENSRLRKALQSRYRVGILDEFQDTDGAQYEIFKRLFLES
NDDRALYLIGDPKQSIYGFRGADIGIYLQAKEELKKHKAEEISLNVNYRSVPELIRAYNE
IFGGKSGKQSFFPILEQSIPIQYEPVFAPKENIKVLLSDKQKQGPIQIVRFTGKDFWNTQ
DAKNAWGQFISEEILKLIHKEDPFTYQVAEGDLYYVEKKLKLREIAVLVKSKSEGKLAEQ
FLKLRGIPCSFYKQEGIYQSAESYQISNIFECLLDPNKPSSYRKLLLGDLFQIHPAHLPY
FDEHSIDSYEKSILDRWKTLSMDRKFSELFRSIEEDSRIFLTEDATDIDWERKRTNYRQI
FRRLLQFQIANQADLEEILEELKLLQKSFKNEEELPLFEKETEKDAVQILTLHASKGLEW
PVVFLFNLSGDYIPEVYDYPFVDKDGKLSWKLSLWDNEEEKKISKEIYSNQSLNENKRLL
YVGITRSKVRIYLPFYTPLNNWKTRDSAYYKILYPRLQSILENEIDTDLFHVVSWAPTPF
DSTDPKRIDWNLDSEICFTPLLYEEPETSKTIRLNSYSSLRTSMNFSEEVSLSVLEEKTR
IQSDDVENSETVIKDALPSSASIGSFLHSLLEELDFSIFKTTTSKELLKNEKIISRMDFH
LDYFRILKREEGRFILEKETVQKRTVEILWNLLNANILDQKGALFRLVDLPKENRVSEMD
FYLDLDTNPGNFLRGSIDLVFQIDDKFYLADYKSNLLEDYSTISLKRNVENLESRYDLQR
DIYALVLYEYLKNLFGPKEALQKIGGVYYFFLRGMIYGESSGIYSDFFWSLERIESIRKT
VLESTTFRWEKSN
NT seq 3102 nt   +upstreamnt  +downstreamnt
atagaagcatccgctggaactggaaaaacttatacgattatggaaatcgtaatagacctg
attttagaacataagatccctttgactcagattttaattttgacctatacagaaaaggcg
gcgggagaactcaaagaaaggcttagaaaaaaactgatcagttccggacttaccaaagag
gccagggaactggatcaggtaacgatttctacaatacacggattttgtaatgcgatttta
aaagaatatccggtggaaacggaaactcatacaaactggatcttaacggatgctctggaa
aggttgaatattgccttatataaacttcaacacgaggaatggaattcttgggtagatcca
gaaaaattagaagattttattttatcttcgaaatatagattcaaaaaagaaaatattcta
atttctgcatctaagcttttaagcggaaaaaagtatgagtattctaacgagacaactact
atgacctcggagacttttcttcaaaagactgcattgatcattgcggatatggttttaaag
gagtttaaaacttcggagtggatgagttacgaccagatgattttaaaaactagagattct
ttggaaaattctcgtcttagaaaagcgcttcaaagtagatacagagtagggatcttggac
gagtttcaagatacggatggagcacagtatgaaattttcaaacgactttttttagaatct
aacgatgacagagcgttgtatctaatcggagatccgaaacaatctatctacggatttaga
ggagcggacataggaatttatcttcaagcaaaagaagaattaaaaaaacataaagcagaa
gaaatttcattgaacgtcaattatagatcggttcctgagttgatccgagcttataatgag
atctttggtggtaaatctgggaaacagagttttttcccgattttagaacaatcgattccg
attcaatatgagcctgtatttgctcctaaagagaatattaaagttttattaagcgataaa
cagaaacaaggtccgattcagattgtacggtttacaggaaaagatttttggaacactcaa
gacgcaaaaaatgcttggggacaatttatctcggaggaaattttaaaactcattcacaaa
gaggacccatttacttatcaagttgctgaaggtgatttgtattatgtagaaaaaaaactg
aaacttcgtgaaattgccgttttagtaaaaagtaagtccgaaggaaaacttgcggaacaa
tttttaaaacttagagggattccttgttctttttataaacaagaagggatttatcaatcg
gcggaatcctatcagatttctaatatatttgaatgtcttttagatccaaataaaccttcc
tcctatagaaaacttttgctgggagatttgtttcaaattcatccggcgcatcttccttat
tttgatgaacattcgatcgattcgtatgagaaaagtatattagatcgttggaaaactctt
tctatggatcgtaaattttctgagttattccgttctatcgaagaagacagtaggattttt
ttgaccgaagacgcaacggatatagactgggaaagaaaaagaaccaattacagacagatt
tttagaaggcttcttcagtttcaaattgcaaatcaagccgatctagaagaaatattagaa
gaattgaaactactacaaaaaagttttaaaaacgaagaggaacttcctttattcgaaaaa
gaaaccgaaaaagatgcggttcagatactaactttacacgcttccaaaggtttggaatgg
cctgtcgtttttttgtttaatctttctggagattatattccagaagtctacgactatcct
tttgtggataaggacggaaaactgtcttggaaattgagtctttgggataacgaagaagaa
aagaaaattagtaaagaaatatattctaatcaatccttgaacgaaaataaaaggcttcta
tacgtgggaatcactcggtccaaggtaaggatttatcttccattttatactccattgaac
aattggaaaacaagagattcggcatattataaaattctttaccctagacttcaaagtata
ttggaaaatgaaattgatacggatttatttcacgtggtttcttgggcccctacacctttt
gattctaccgatcctaaacgaattgattggaatcttgattcagaaatatgttttactcct
ttactctatgaagaaccggaaacttctaaaacgattcgtcttaatagttattcttctttg
agaactagtatgaatttttcggaagaagtatctctttccgtactagaagaaaaaacccgt
atacagtcagacgatgtggaaaactccgaaacggtaatcaaagacgcacttccttcttct
gcttctattggttcttttttacattctcttttagaagaattagatttttccatttttaaa
actacaacatctaaagaacttttaaaaaacgaaaaaattatttccagaatggattttcat
ttggactactttcgaattttaaaaagagaagagggccgttttattttagaaaaggaaacg
gttcaaaaaaggacggtagaaattttatggaatctactgaacgcaaatattctagatcag
aaaggggctttatttcgccttgtggaccttcccaaagaaaatagggtttctgaaatggat
ttttatttggatctagatactaatcctggaaattttttaagaggttccatcgatttagta
tttcagattgatgataaattttatttagcggattataagtctaatttgcttgaagattat
tctaccatctctttaaaaagaaatgtggaaaatttagaaagtagatatgatcttcaaaga
gatatttacgcattagtactttatgaatatttaaagaatttatttggtccaaaggaagca
ttacaaaaaatcggtggagtatattatttttttctaagaggaatgatctatggagaaagt
tctggaatttattcagattttttttggagtttggaaagaatcgaatctatccgtaaaact
gttttagaatccacgacttttcgatgggagaaatcgaattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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