KEGG   Leptospira interrogans serovar Lai IPAV: LIF_A1590
Entry
LIF_A1590         CDS       T01983                                 
Symbol
pcnB
Name
(GenBank) tRNA nucleotidyltransferase/poly A polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
lie  Leptospira interrogans serovar Lai IPAV
Pathway
lie03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lie00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LIF_A1590 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lie03019]
    LIF_A1590 (pcnB)
Enzymes [BR:lie01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     LIF_A1590 (pcnB)
Messenger RNA biogenesis [BR:lie03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LIF_A1590 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: AER02389
Position
1:complement(1944583..1945881)
AA seq 432 aa
MTNVDPVLLIQKIPKIFLEDILHITQIIRKEGGECYLVGGSVRDLALSKIPKEFDLTTSL
LPEKILSLFKRTIPTGIKHGTVTVLIQDRAYEITTFRKDADYLDGRRPEIVEFGVSLSED
LKRRDFTMNALAFDLETKALIDEHSGLLDIQNKIIRTIGNPIERFTEDGLRPIRAIRFVS
SLGFHLEPNTAKAIILCKNVTAKVSRERVHDELNKILKSKNPTPSLKLFKEFGILELFTK
LKLYPVKNEIVENKIQEVPAFPLSLRLSFLQAWLFGNFQNRNSAKQFMKDLRYSNQNTKE
SIFFSDTISVLLNHKNDSTLTDSEIRKILLHPVCVYSGRENLKIVIEHILNLAYIYEPTL
KSVFNFHKILDLLLQPQALLVTELALRGEDILEVCPNLPPKEIGSVLGKLLSFVLENPEA
NRKDSLIPLLPK
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgactaacgtagatccagttttattgattcaaaaaattcctaaaatttttctggaagat
atacttcatattacacaaatcattcgcaaagaaggcggagaatgttatttagtaggaggt
tcggtacgagatttagcactttctaaaattccaaaagaatttgatcttactacttctctt
ttacctgagaaaattctttccttatttaaaagaaccattcccactggaatcaaacatgga
acggtaaccgttctgatacaagatcgcgcttacgaaattacaacctttcgaaaagacgca
gactacttagacggaagaaggccggagattgtagaatttggagtttcattaagtgaagat
ttaaaacgaagagatttcactatgaatgcgctcgcttttgatttagaaacgaaagctctc
atagacgaacattccggtctcttggatattcaaaataaaatcatccgtacaatcggaaat
ccaatcgaaagatttacggaagacggacttagaccaattcgagcgattcgttttgtaagt
agtctgggttttcatttagaaccgaacacagcaaaggcgatcattctttgcaaaaacgta
accgcaaaggtttccagagaaagagttcatgacgaactgaataaaattctaaaaagtaaa
aatcctactccttctttaaaattatttaaggaatttggaattttagaattgttcaccaaa
ctcaaactctatcctgtaaaaaatgaaatcgtagaaaataaaatccaagaagttccagcg
tttcctcttagtctcagactttcttttttacaagcttggttattcgggaattttcaaaac
cgaaattctgcaaaacaatttatgaaagatctacgttattccaatcaaaacacaaaagaa
tcaatctttttctcggatactatttccgttttgttgaaccataaaaacgattctacacta
accgactcggaaatcagaaaaattttattacatcccgtttgtgtttattccgggagagaa
aatcttaaaattgtaattgaacacattctgaatcttgcatatatctatgaaccaactcta
aaatctgttttcaattttcataaaatattagatctattattacaaccacaagctctttta
gttaccgagttagctcttagaggcgaggatattcttgaagtttgtccaaatctccctccc
aaagaaatcggttctgttcttggaaaactcctttcttttgtgctcgaaaatccggaagca
aatcgaaaagattctttgattcctctacttccaaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

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