KEGG   Leishmania infantum: LINJ_08_0840
Entry
LINJ_08_0840      CDS       T01112                                 
Name
(RefSeq) putative mitochondrial DNA polymerase beta-PAK
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
lif  Leishmania infantum
Pathway
lif03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LINJ_08_0840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lif03400]
    LINJ_08_0840
Enzymes [BR:lif01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LINJ_08_0840
DNA repair and recombination proteins [BR:lif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     LINJ_08_0840
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     LINJ_08_0840
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 NTP_transf_2
Other DBs
NCBI-GeneID: 5066766
NCBI-ProteinID: XP_001463421
UniProt: A4HTN0
Position
8:complement(352899..357344)
AA seq 1481 aa
MRIFLSSAVPRTGWSLRRRRADPLCVVAAALVAASLSCADGQRLIHGPPRLSSTWRRGAR
RLPGPSAFLPASSAVAASLTAQCRGVSSTTSTSADATAAAASAAAAVAALSTGTKLRHRR
GAHRKRGRVSATAAAATTPPLNAPLGDGANGSFSVVDPVVPASVLVNPSNTSSEPLRRRA
VKSSDAAVTDARLCALGDTEAEAEPPVVTAAAHLNGFGKSANKPSTTPQPAGEADAAESV
PAPSVTAVVAAEMPSPCRKRKSGTAKRGTRGRRAAVETTVELVAVAAAPAAASSPAAATL
LAEAPAEAIKMAAAVSRERLSRGLNKRRSRRSGAGTVTAASAGDAEADEVVTAGVTVVPS
VAVNPNLASSLTAGAVEGEGGTPSVDPVRAAALPPAPQHLDATGRVVASDADAVEGRVSS
GSRKRIARQARQKYVEEPANARSSGVVLDNYKDGSAADVDKNPDEISEDGGARPSGRLRR
ASSRTRSGKRLRAKAPTAAASTLVEDAIAASVAKAVAEGVIGAAGQAPATGAATAGGATL
ASFSLLTAATSHKPASKTTTTTTTITSADTKVPCAPTAEVESLEPKTDADGEGPAEAISS
TAASRAPRNRERAGGKRMKKRLLAPAAVAAASAAVVAAPPPPPMAAAADDGKTATTPRPA
DSFKRLFDTVDAAKGISSLALKKRLAAQIVRRRWQLQRGLTLSPQALLSTATPAADEAGV
MATSAAAKADEGAAAVTAPKSSAPSPTSPRRRLLQGKKSASLEASASSPIAAAPLPEKPA
QSDEAAVAGGAKSKSRITKKGGKRGGSAARKNSGHRVAMAAAASVAPVAEPTKAAEVEDP
ASDADREADVAAAMAAAVELVSKPEVIDDEFSLAPQACDDAAAHATPKSHSPSALAAGRA
SQQQELLQSAGVSKVAYGASGGSSANGSGNHAGSSGSSNGGKGGKGANSKDTLFFPDYRE
RVVQIFEQLTQINSALGERFKSQLYGRTVERFKRGDKVFQLLPPNLLPLPEEDPKKKAII
EALYKDDPAAQKKRVEEVERNRAKRSLVLSSDNLIPGLGTKLREKVIEILVTGGLEELHR
QEAKPIIRAIRELTQVHGVGPRTAIDYFKKYGISTVAQLRDYAIKAGELDMSNKDSGKPS
NLVVCADKSKFHLNDAQRLGLVYYEDMCHRIPHEEGRLHEAFMKLRMRKYLGKDYELVVC
GSYRRQVESAGDIDVLITHKRSATEGGGRPLLPPSEVLGSFLAGLKADKYIEATLAQGPT
KFMGLCRLRAMGTESVSAATGKGKTAKTNGKAPTKFRARRLDVRYVDSDSFPAAMLYFTG
SKNFNVIMRSEAIKKHCVLNEYGLFRKPTRKQMQHYSVVQKNPDMSFHDMITRLARFDLS
AIKDEENELASGSSAEAGGGASGATAAGSGASGDADGAASKKVTAAFKKIKKKGKEKTKQ
ELAELREMAKIVERQRVKACTEREIFEALGMDYVPPKDRSV
NT seq 4446 nt   +upstreamnt  +downstreamnt
atgcggattttcctcagctcggctgtgccgcgcacagggtggagtctccgtcgccgccgt
gctgacccactctgcgtagtggccgccgctctcgttgcggcatctctgtcgtgcgccgac
ggccagcgtctcattcatgggccgccgcggttgtcttcgacgtggcggcgcggtgctagg
cgtctgccagggccctctgcgttcctgcctgcctcatcggcggtagcggcgtcgctaaca
gcgcagtgccgcggcgtttcgagcacgacgagcacatcagctgatgcaactgctgccgct
gcttctgctgctgctgccgtcgccgccttgtcaacggggacgaagttgcgccatcgccgc
ggcgctcatcgcaagcgcggccgtgtctcggcgacggcagcggcggcgaccacgccgccc
ctcaatgcgccgctcggggatggcgcgaacggcagcttctccgttgtcgatcctgttgtg
ccggcgtctgtgctggtcaacccatcaaacacatccagcgaaccgctcaggcgacgagcg
gtcaagagcagtgacgcagcggtgacagatgcgcgcctgtgtgcattgggcgataccgaa
gccgaggcggagccaccggtggtcaccgctgccgctcacctcaacggctttggcaaatcc
gctaataagccttcgacgacccctcagccagctggcgaggcggatgctgctgagtcggtg
cccgcaccatccgtgacggctgtcgttgccgctgagatgccctcgccttgccgcaaaagg
aaaagcggcacggcaaagaggggtaccaggggccgccgcgcggcggtggagacgactgtg
gagctggtcgctgttgctgcagctcctgctgccgcttctagccctgctgctgcgacgctg
ttagcagaggcgccagccgaggcaatcaaaatggccgctgcggtctcacgcgaaaggcta
tcgcgaggcctaaataaaaggcgctcgaggcgcagcggagctggtaccgtcacggctgcc
tctgctggcgacgccgaggcggacgaggtcgtgactgccggcgtcacagtggtgccatct
gtcgctgtcaaccctaacctcgcatcttcattgacggcaggcgccgttgaaggggaaggt
ggcacaccctcagtcgacccggtgagagccgcagccctgccgccggccccacagcacctg
gatgccactggtcgtgtggtcgcgtccgatgccgacgctgttgaggggcgcgtgagcagc
ggcagcaggaaacgtatagcgcggcaagcgaggcagaaatacgtcgaggagccggcgaac
gcgaggagctcgggagtcgttctggacaattacaaggacggtagtgctgctgatgtggac
aagaatccagatgaaatcagcgaggatggtggtgctcgacccagtggtcggctcaggcga
gccagctcacgcacccgaagtggcaagcggctgcgcgccaaggcaccgacagctgccgcc
agcactctggtagaagacgccatcgcggcttctgtggccaaggcggtcgctgagggcgtt
ataggcgctgcagggcaagcaccagcgactggcgcggcgacggcaggaggggccacgttg
gcgtccttctcgcttctcactgcggcaacgtcccacaagcccgcgagcaagaccaccacc
acgaccacgaccatcacgagtgcagacactaaggtgccatgcgctcccaccgccgaggtg
gagtcgttggagccgaagacggatgccgacggcgaaggtccagcagaggccatcagctcc
actgctgcctctcgcgcgcccaggaacagggagcgggctggaggcaaacggatgaagaag
agacttcttgcacctgccgccgtcgccgcggcctcggcagcggtagtggcggcaccacca
ccaccacccatggcggctgctgcggacgatgggaagacggcaacgacaccgcggccggcg
gactcgttcaagaggctcttcgataccgtcgacgccgcgaaggggatctcctctcttgcc
ttgaaaaagcgtctcgccgcgcagatcgttcgtcgccgctggcagctgcagcgggggctc
acgctgtccccgcaagccctcctttccaccgccacaccggcagcagacgaagcaggcgtt
atggcaacctcagcagcagccaaggccgacgagggggcagcggcggtgacggcgcctaag
tcgtctgcaccttcgccgacatcgccgcgccgacgtctgctgcaaggaaagaagtcggct
tcgcttgaagcgtctgcgtcgtcaccgatagcggctgcgcctctaccggaaaagccggcg
cagagcgacgaggcagccgtcgcaggtggtgccaagtcgaagagccgtatcaccaagaag
ggtggcaagcgtggcggatcggcggcaaggaaaaatagcgggcacagggttgccatggct
gcagcagcgtccgttgcacccgtggcggagccgaccaaggctgctgaggtcgaggatcct
gccagtgacgcagatcgagaggcggatgtggcggcggcaatggcagcagcggtggagctg
gtgtcaaagccggaggtcatcgatgacgagttctcgctagcaccgcaggcgtgcgacgat
gccgctgcccatgcgacgccgaagtcgcactctccatctgccctcgccgccggccgcgca
tcgcagcagcaggagctgcttcagagtgccggcgtctcgaaggtagcttacggcgccagt
ggcggcagcagcgctaacggatcgggcaatcatgccggcagtagcggcagcagcaacggt
ggcaagggcggcaaaggtgcgaattcgaaggacacgctcttcttccccgactaccgcgag
cgcgtcgtgcagatatttgagcagctgacgcagatcaacagtgccctcggcgagcgcttc
aagtcgcagttgtacgggcgcacggtagaacgcttcaagcgcggcgacaaggtatttcag
ctgctgccgccgaacttgctgccgctgcccgaggaagacccgaagaaaaaggcgataatc
gaggcgctctacaaggacgaccccgcggcgcagaagaagcgcgtggaggaggtggagcgc
aaccgggcgaaacgcagtcttgtgctctcctccgacaacctcatcccaggcctggggacg
aagctgcgggagaaagtaatcgaaatcctggtgacgggtggcttggaggagctgcaccgg
caggaggcgaagcccatcattcgcgccatccgagagctcacacaggtgcacggcgtcggc
ccgcgcaccgctatcgactacttcaagaagtacggcatcagcaccgtcgcgcagcttcgc
gactacgccatcaaggcaggggagctcgacatgagcaacaaggacagcggcaagccgtcg
aatctcgtggtctgtgctgacaagtccaagttccacttgaacgacgcgcagcggctcggg
cttgtctactacgaggacatgtgccaccgcatcccgcacgaagagggccgcctgcacgag
gctttcatgaagctgcgcatgcgaaagtaccttggcaaggactacgagctcgttgtgtgt
ggtagctaccgtcgtcaagttgagtccgctggtgacatcgatgtgctcattacacacaag
cgcagcgcgacggagggcggtggccgtcctttgttaccaccgtcggaggtgcttggctcg
ttcctcgctgggctcaaggcggacaagtacatcgaggctacgctggcgcaggggccgacg
aagttcatggggctgtgccgtctgcgcgcgatgggcaccgaatctgtatcggctgctacg
ggcaagggcaagacagcgaagacgaacggcaaggcgccaaccaagttccgcgcgcgccgc
ctcgatgtccgctatgtggactcggacagcttccctgcagcgatgctttacttcaccggc
agcaagaacttcaacgtcattatgcgcagcgaagccatcaagaagcactgcgtcctcaac
gagtacggcctcttccgcaagccgacgcgcaagcagatgcagcactacagtgttgtgcag
aagaacccggatatgagcttccacgacatgatcacccgcctcgctcgcttcgacctctcc
gccatcaaggacgaggagaatgagctcgccagcggatcgtcggccgaagctggaggcggg
gctagcggtgcgactgctgccgggagcggtgccagcggcgacgcagacggtgcggcatca
aagaaggtgacggctgcgttcaagaagatcaagaagaaggggaaggagaagacgaagcag
gagctcgccgagctgcgtgagatggcgaagattgtggagcggcagcgggttaaggcgtgc
acggagcgcgagatcttcgaggcgctgggcatggactacgtccctccaaaagaccgcagc
gtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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